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Highly Promiscuous Oxidases Discovered in the Bovine Rumen Microbiome

Authors: Ufarté, Lisa; Veronese, Gabrielle; Cecchini, Davide; Tauzin, Alexandra; Rizzo, Angeline; Morgavi, Diego; Cathala, Bernard; +5 Authors

Highly Promiscuous Oxidases Discovered in the Bovine Rumen Microbiome

Abstract

The bovine rumen hosts a diverse microbiota, which is highly specialized in the degradation of lignocellulose. Ruminal bacteria, in particular, are well equipped to deconstruct plant cell wall polysaccharides. Nevertheless, their potential role in the breakdown of the lignin network has never been investigated. In this study, we used functional metagenomics to identify bacterial redox enzymes acting on polyaromatic compounds. A new methodology was developed to explore the potential of uncultured microbes to degrade lignin derivatives, namely kraft lignin and lignosulfonate. From a fosmid library covering 0.7 Gb of metagenomic DNA, three hit clones were identified, producing enzymes able to oxidize a wide variety of polyaromatic compounds without the need for the addition of copper, manganese, or mediators. These promiscuous redox enzymes could thus be of potential interest both in plant biomass refining and dye remediation. The enzymes were derived from uncultured Clostridia, and belong to complex gene clusters involving proteins of different functional types, including hemicellulases, which likely work in synergy to produce substrate degradation.

Country
France
Keywords

570, bovin, lignin, microbiome, bovine rumen, functional metagenomics, dye bioremediation, Microbiology, 630, redox enzyme, oxydase, lignin degradation, [SDV.MP] Life Sciences [q-bio]/Microbiology and Parasitology, rumen, Microbiology and Parasitology, oxidase, redox enzymes, lignine, Microbiologie et Parasitologie, QR1-502, [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology, cell wall, dégradation, biorefining, paroi cellulaire, functional metagenomic, bovine rumen;microbiome;functional metagenomic;lignin degradation;redox enzyme;biorefining;dye bioremediation

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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