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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Altenmüller, Konrad; Cebrián, Susana; Dafni, Theopisti; Díez-Ibáñez, David; +19 Authors

    What's Changed use [[(]]) instead of <<(>>) for analysis plots to correct invalid xml syntax by @lobis in https://github.com/rest-for-physics/framework/pull/362 Few minor fixes by @jgalan in https://github.com/rest-for-physics/framework/pull/364 Upgrading root installation to root-6.26.10 by @juanangp in https://github.com/rest-for-physics/framework/pull/361 Add pre-commit hooks by @lobis in https://github.com/rest-for-physics/framework/pull/360 Sync pre-commit strategy accross submodules by @lobis in https://github.com/rest-for-physics/framework/pull/373 Fixing issue with [[ ]] formatting, replacing by {{ }} by @jgalan in https://github.com/rest-for-physics/framework/pull/370 Update pre-commit check script to work for auto-updates by @lobis in https://github.com/rest-for-physics/framework/pull/376 Adding submodule validation inside framework by @juanangp in https://github.com/rest-for-physics/framework/pull/371 Replacing custom branch pipeline by master by @juanangp in https://github.com/rest-for-physics/framework/pull/377 Addressing bug in pull-submodules by @juanangp in https://github.com/rest-for-physics/framework/pull/378 REST_ValidateGeometry.C. Updating to new GDML REST format by @jgalan in https://github.com/rest-for-physics/framework/pull/383 Improve pre-commit files check script by @lobis in https://github.com/rest-for-physics/framework/pull/381 Updating validation file of PandaX-III by @jgalan in https://github.com/rest-for-physics/framework/pull/385 Implementing TRestCut inside TRestDataSet by @juanangp in https://github.com/rest-for-physics/framework/pull/391 Adding possibility to add a cut on observable parameters in TRestDataSet by @juanangp in https://github.com/rest-for-physics/framework/pull/386 TRestAnalysisTree::GetIntegral and GetContour methods added by @jgalan in https://github.com/rest-for-physics/framework/pull/387 TRestAnalysisTree. Reviewing documentation by @jgalan in https://github.com/rest-for-physics/framework/pull/343 clear-install-dir is performed before add-subdir by @nkx111 in https://github.com/rest-for-physics/framework/pull/394 New metadata classes to perform calibration and odds analysis over a TRestDataSet by @juanangp in https://github.com/rest-for-physics/framework/pull/392 Fix bug when processing files with a single event by @nkx111 in https://github.com/rest-for-physics/framework/pull/393 TRestAnalysisTree add branch types of unsigned xx by @nkx111 in https://github.com/rest-for-physics/framework/pull/396 Update framework validation with restG4 by @juanangp in https://github.com/rest-for-physics/framework/pull/403 TRestAnalysisTree fixing observable estimators by @jgalan in https://github.com/rest-for-physics/framework/pull/409 Updating installROOT.sh by @raulena333 in https://github.com/rest-for-physics/framework/pull/410 Addressing compilation issue in macOS introduced on TRestDataSetOdds by @juanangp in https://github.com/rest-for-physics/framework/pull/415 Fixing MacOs libraries identification by @jgalan in https://github.com/rest-for-physics/framework/pull/419 MacroRootDict. Improving the identification of structures for dictionary generation by @jgalan in https://github.com/rest-for-physics/framework/pull/421 Fixing bug on TRestStringHelper::isANumber by @jgalan in https://github.com/rest-for-physics/framework/pull/424 Update restG4 framework validation to point to master by @juanangp in https://github.com/rest-for-physics/framework/pull/414 Adding uninstall target and proper handling of pcm files by @juanangp in https://github.com/rest-for-physics/framework/pull/397 Fix on TRestMetadata and TRestDataSet add-ons by @jgalan in https://github.com/rest-for-physics/framework/pull/427 TRestHits: error in gaussian fit is now defined by the user by @cmargalejo in https://github.com/rest-for-physics/framework/pull/428 Minor TRestDataSet and TRestRun fixes by @jgalan in https://github.com/rest-for-physics/framework/pull/430 REST_StringHelper::isAExpression. Fixing a bug by @jgalan in https://github.com/rest-for-physics/framework/pull/431 Updating validation.yml for using new readout validation by @jgalan in https://github.com/rest-for-physics/framework/pull/433 Masks debugging by @jgalan in https://github.com/rest-for-physics/framework/pull/437 Updating pipelines for readout updates by @jgalan in https://github.com/rest-for-physics/framework/pull/438 Changing visualization GEOM_SCALE to 1 by @jgalan in https://github.com/rest-for-physics/framework/pull/440 Adjust metadata writing sequence to avoid StreamerInfo missing by @nkx111 in https://github.com/rest-for-physics/framework/pull/435 TRestDataSet now allows new user defined columns at the dataset initialisation stage. by @jgalan in https://github.com/rest-for-physics/framework/pull/432 New class TRestDataSetPlot to perform plots over datasets by @juanangp in https://github.com/rest-for-physics/framework/pull/400 Add macro to find library version from git by @lobis in https://github.com/rest-for-physics/framework/pull/450 New Contributors @raulena333 made their first contribution in https://github.com/rest-for-physics/framework/pull/410 Full Changelog: https://github.com/rest-for-physics/framework/compare/v2.3.15...v2.4.0

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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    Software . 2023
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    Authors: Charles Kawczynski; Yair Cohen; Anna Jaruga; Ignacio Lopez-Gomez; +4 Authors

    TurbulenceConvection v1.3.1 Diff since v1.3.0 📢 API Changes: 🚀 Features 📑 Documentation 🐛 Fixes

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    Authors: Satler, Jordan; Herre, Allen; Heath, Tracy; Machado, Carlos; +4 Authors

    Obligate pollination mutualisms, in which plant and pollinator lineages depend on each other for reproduction, often exhibit high levels of species-specificity. However, cases in which two or more pollinator species share a single host species (host sharing), or two or more host species share a single pollinator species (pollinator sharing), are known to occur in the current ecological time. Further, evidence for host switching in evolutionary time is increasingly being recognized in these systems. The degree to which departures from strict specificity differentially affect the potential for hybridization and introgression in the associated host or pollinator is unclear. We addressed this question using genome-wide sequence data from five sympatric Panamanian free-standing fig species (Ficus subgenus Pharmacosycea, section Pharmacosycea) and their six associated fig pollinator wasp species (Tetrapus). Two of the five fig species, F. glabrata and F. maxima, were found to regularly share pollinators. In these species, ongoing hybridization was demonstrated by the detection of several first-generation (F1) hybrid individuals, and historical introgression was indicated by phylogenetic network analysis. In contrast, although two of the pollinator species regularly share hosts, all six species were genetically distinct and deeply divergent, with no evidence for either hybridization or introgression. This pattern is consistent with results from other obligate pollination mutualisms, suggesting that, in contrast to their host plants, pollinators appear to be reproductively isolated, even when different species of pollinators mate in shared hosts. Funding provided by: National Science FoundationCrossref Funder Registry ID: http://dx.doi.org/10.13039/100000001Award Number: DEB-1556853 Please see the associated manuscript for details.

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    Software . 2022
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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    Yi-Min Chou, Yi-Ming Chan, Jia-Hong Lee, Chih-Yi Chiu, Chu-Song Chen, "Unifying and Merging Well-trained Deep Neural Networks for Inference Stage," International Joint Conference on Artificial Intelligence, IJCAI-ECAI-2018

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    Authors: James Rine; Andrew Johnston; Joseph H Kennedy;

    Added Autorift jobs now allow submission with Sentinel 2 granules

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    ZENODO
    Software . 2020
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    Authors: De Leeuw, Josh; Gilbert, Becky; Bjoluc; Kristiyip; +16 Authors

    Major Changes #2183 c8760b1 Thanks @jodeleeuw, @becky-gilbert, @bjoluc! - jsPsych is now fully modular, with individual NPM packages for the core library, plugins, and extensions. To support this change, we've made a number of breaking changes. We've added a guide for migrating from version 6.x to 7.x to the documentation, and updated the hello world tutorial with instructions for configuring jsPsych in three different ways. In addition to enabling package management, some of the benefits that this change provides include an improved developer experience with IntelliSense code hints, proper encapsulation of jsPsych so that multiple instances can be run on the same page, and easier integration with modern JavaScript tools like bundlers. Patch Changes #1533 7b16a1d Thanks @becky-gilbert! - Fixed a bug that caused the trial to not end when the trial_ends_after_video parameter was set to true and the video ended at a specific time via the stop parameter. #2192 2883e421 Thanks @becky-gilbert! - Fix implementation of start parameter in video-* plugins so that it works in iOS/MacOS browsers. Updated dependencies [37b85f95, 37b85f95, 37b85f95, 37b85f95, 37b85f95, 37b85f95]: jspsych@7.0.0

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    Authors: Daniel Pett; JWexlerBM;

    An application for interacting with the Egypt Exploration Society Flickr stream

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366,306 Research products
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    Authors: Altenmüller, Konrad; Cebrián, Susana; Dafni, Theopisti; Díez-Ibáñez, David; +19 Authors

    What's Changed use [[(]]) instead of <<(>>) for analysis plots to correct invalid xml syntax by @lobis in https://github.com/rest-for-physics/framework/pull/362 Few minor fixes by @jgalan in https://github.com/rest-for-physics/framework/pull/364 Upgrading root installation to root-6.26.10 by @juanangp in https://github.com/rest-for-physics/framework/pull/361 Add pre-commit hooks by @lobis in https://github.com/rest-for-physics/framework/pull/360 Sync pre-commit strategy accross submodules by @lobis in https://github.com/rest-for-physics/framework/pull/373 Fixing issue with [[ ]] formatting, replacing by {{ }} by @jgalan in https://github.com/rest-for-physics/framework/pull/370 Update pre-commit check script to work for auto-updates by @lobis in https://github.com/rest-for-physics/framework/pull/376 Adding submodule validation inside framework by @juanangp in https://github.com/rest-for-physics/framework/pull/371 Replacing custom branch pipeline by master by @juanangp in https://github.com/rest-for-physics/framework/pull/377 Addressing bug in pull-submodules by @juanangp in https://github.com/rest-for-physics/framework/pull/378 REST_ValidateGeometry.C. Updating to new GDML REST format by @jgalan in https://github.com/rest-for-physics/framework/pull/383 Improve pre-commit files check script by @lobis in https://github.com/rest-for-physics/framework/pull/381 Updating validation file of PandaX-III by @jgalan in https://github.com/rest-for-physics/framework/pull/385 Implementing TRestCut inside TRestDataSet by @juanangp in https://github.com/rest-for-physics/framework/pull/391 Adding possibility to add a cut on observable parameters in TRestDataSet by @juanangp in https://github.com/rest-for-physics/framework/pull/386 TRestAnalysisTree::GetIntegral and GetContour methods added by @jgalan in https://github.com/rest-for-physics/framework/pull/387 TRestAnalysisTree. Reviewing documentation by @jgalan in https://github.com/rest-for-physics/framework/pull/343 clear-install-dir is performed before add-subdir by @nkx111 in https://github.com/rest-for-physics/framework/pull/394 New metadata classes to perform calibration and odds analysis over a TRestDataSet by @juanangp in https://github.com/rest-for-physics/framework/pull/392 Fix bug when processing files with a single event by @nkx111 in https://github.com/rest-for-physics/framework/pull/393 TRestAnalysisTree add branch types of unsigned xx by @nkx111 in https://github.com/rest-for-physics/framework/pull/396 Update framework validation with restG4 by @juanangp in https://github.com/rest-for-physics/framework/pull/403 TRestAnalysisTree fixing observable estimators by @jgalan in https://github.com/rest-for-physics/framework/pull/409 Updating installROOT.sh by @raulena333 in https://github.com/rest-for-physics/framework/pull/410 Addressing compilation issue in macOS introduced on TRestDataSetOdds by @juanangp in https://github.com/rest-for-physics/framework/pull/415 Fixing MacOs libraries identification by @jgalan in https://github.com/rest-for-physics/framework/pull/419 MacroRootDict. Improving the identification of structures for dictionary generation by @jgalan in https://github.com/rest-for-physics/framework/pull/421 Fixing bug on TRestStringHelper::isANumber by @jgalan in https://github.com/rest-for-physics/framework/pull/424 Update restG4 framework validation to point to master by @juanangp in https://github.com/rest-for-physics/framework/pull/414 Adding uninstall target and proper handling of pcm files by @juanangp in https://github.com/rest-for-physics/framework/pull/397 Fix on TRestMetadata and TRestDataSet add-ons by @jgalan in https://github.com/rest-for-physics/framework/pull/427 TRestHits: error in gaussian fit is now defined by the user by @cmargalejo in https://github.com/rest-for-physics/framework/pull/428 Minor TRestDataSet and TRestRun fixes by @jgalan in https://github.com/rest-for-physics/framework/pull/430 REST_StringHelper::isAExpression. Fixing a bug by @jgalan in https://github.com/rest-for-physics/framework/pull/431 Updating validation.yml for using new readout validation by @jgalan in https://github.com/rest-for-physics/framework/pull/433 Masks debugging by @jgalan in https://github.com/rest-for-physics/framework/pull/437 Updating pipelines for readout updates by @jgalan in https://github.com/rest-for-physics/framework/pull/438 Changing visualization GEOM_SCALE to 1 by @jgalan in https://github.com/rest-for-physics/framework/pull/440 Adjust metadata writing sequence to avoid StreamerInfo missing by @nkx111 in https://github.com/rest-for-physics/framework/pull/435 TRestDataSet now allows new user defined columns at the dataset initialisation stage. by @jgalan in https://github.com/rest-for-physics/framework/pull/432 New class TRestDataSetPlot to perform plots over datasets by @juanangp in https://github.com/rest-for-physics/framework/pull/400 Add macro to find library version from git by @lobis in https://github.com/rest-for-physics/framework/pull/450 New Contributors @raulena333 made their first contribution in https://github.com/rest-for-physics/framework/pull/410 Full Changelog: https://github.com/rest-for-physics/framework/compare/v2.3.15...v2.4.0

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    Authors: Charles Kawczynski; Yair Cohen; Anna Jaruga; Ignacio Lopez-Gomez; +4 Authors

    TurbulenceConvection v1.3.1 Diff since v1.3.0 📢 API Changes: 🚀 Features 📑 Documentation 🐛 Fixes

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    Authors: Satler, Jordan; Herre, Allen; Heath, Tracy; Machado, Carlos; +4 Authors

    Obligate pollination mutualisms, in which plant and pollinator lineages depend on each other for reproduction, often exhibit high levels of species-specificity. However, cases in which two or more pollinator species share a single host species (host sharing), or two or more host species share a single pollinator species (pollinator sharing), are known to occur in the current ecological time. Further, evidence for host switching in evolutionary time is increasingly being recognized in these systems. The degree to which departures from strict specificity differentially affect the potential for hybridization and introgression in the associated host or pollinator is unclear. We addressed this question using genome-wide sequence data from five sympatric Panamanian free-standing fig species (Ficus subgenus Pharmacosycea, section Pharmacosycea) and their six associated fig pollinator wasp species (Tetrapus). Two of the five fig species, F. glabrata and F. maxima, were found to regularly share pollinators. In these species, ongoing hybridization was demonstrated by the detection of several first-generation (F1) hybrid individuals, and historical introgression was indicated by phylogenetic network analysis. In contrast, although two of the pollinator species regularly share hosts, all six species were genetically distinct and deeply divergent, with no evidence for either hybridization or introgression. This pattern is consistent with results from other obligate pollination mutualisms, suggesting that, in contrast to their host plants, pollinators appear to be reproductively isolated, even when different species of pollinators mate in shared hosts. Funding provided by: National Science FoundationCrossref Funder Registry ID: http://dx.doi.org/10.13039/100000001Award Number: DEB-1556853 Please see the associated manuscript for details.

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    Yi-Min Chou, Yi-Ming Chan, Jia-Hong Lee, Chih-Yi Chiu, Chu-Song Chen, "Unifying and Merging Well-trained Deep Neural Networks for Inference Stage," International Joint Conference on Artificial Intelligence, IJCAI-ECAI-2018

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    Authors: James Rine; Andrew Johnston; Joseph H Kennedy;

    Added Autorift jobs now allow submission with Sentinel 2 granules

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    Authors: De Leeuw, Josh; Gilbert, Becky; Bjoluc; Kristiyip; +16 Authors

    Major Changes #2183 c8760b1 Thanks @jodeleeuw, @becky-gilbert, @bjoluc! - jsPsych is now fully modular, with individual NPM packages for the core library, plugins, and extensions. To support this change, we've made a number of breaking changes. We've added a guide for migrating from version 6.x to 7.x to the documentation, and updated the hello world tutorial with instructions for configuring jsPsych in three different ways. In addition to enabling package management, some of the benefits that this change provides include an improved developer experience with IntelliSense code hints, proper encapsulation of jsPsych so that multiple instances can be run on the same page, and easier integration with modern JavaScript tools like bundlers. Patch Changes #1533 7b16a1d Thanks @becky-gilbert! - Fixed a bug that caused the trial to not end when the trial_ends_after_video parameter was set to true and the video ended at a specific time via the stop parameter. #2192 2883e421 Thanks @becky-gilbert! - Fix implementation of start parameter in video-* plugins so that it works in iOS/MacOS browsers. Updated dependencies [37b85f95, 37b85f95, 37b85f95, 37b85f95, 37b85f95, 37b85f95]: jspsych@7.0.0

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    Authors: Daniel Pett; JWexlerBM;