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arXiv: 1704.04194
Ultrametric approach to the genetic code and the genome is considered and developed. $p$-Adic degeneracy of the genetic code is pointed out. Ultrametric tree of the codon space is presented. It is shown that codons and amino acids can be treated as $p$-adic ultrametric networks. Ultrametric modification of the Hamming distance is defined and noted how it can be useful. Ultrametric approach with $p$-adic distance is an attractive and promising trend towards investigation of bioinformation.
20 pages. Accepted for publication in Applied Mathematics and Computation
FOS: Computer and information sciences, \(p\)-adic numbers, Computer Science - Information Theory, Information Theory (cs.IT), ultrametrics, Metric Geometry (math.MG), Other Quantitative Biology (q-bio.OT), Quantitative Biology - Other Quantitative Biology, ultrametric network, genetic code, Mathematics - Metric Geometry, FOS: Biological sciences, FOS: Mathematics, bioinformation, ultrametric tree, Genetics and epigenetics, Other analytic theory (analogues of beta and gamma functions, \(p\)-adic integration, etc.)
FOS: Computer and information sciences, \(p\)-adic numbers, Computer Science - Information Theory, Information Theory (cs.IT), ultrametrics, Metric Geometry (math.MG), Other Quantitative Biology (q-bio.OT), Quantitative Biology - Other Quantitative Biology, ultrametric network, genetic code, Mathematics - Metric Geometry, FOS: Biological sciences, FOS: Mathematics, bioinformation, ultrametric tree, Genetics and epigenetics, Other analytic theory (analogues of beta and gamma functions, \(p\)-adic integration, etc.)
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