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Transcriptome-informed identification and characterization of Planococcus citri cis- and trans-isoprenyl diphosphate synthase genes

Authors: Mojca Juteršek; Iryna M. Gerasymenko; Marko Petek; Elisabeth Haumann; Sandra Vacas; Kalyani Kallam; Silvia Gianoglio; +8 Authors

Transcriptome-informed identification and characterization of Planococcus citri cis- and trans-isoprenyl diphosphate synthase genes

Abstract

Insect physiology and reproduction depend on several terpenoid compounds, whose biosynthesis is mainly unknown. One enigmatic group of insect monoterpenoids are mealybug sex pheromones, presumably resulting from the irregular coupling activity of unidentified isoprenyl diphosphate synthases (IDSs). Here, we performed a comprehensive search for IDS coding sequences of the pest mealybug Planococcus citri. We queried the available genomic and newly generated short- and long-read P. citri transcriptomic data and identified 18 putative IDS genes, whose phylogenetic analysis indicates several gene family expansion events. In vitro testing confirmed regular short-chain coupling activity with five gene products. With the candidate with highest IDS activity, we also detected low amounts of irregular coupling products, and determined amino acid residues important for chain-length preference and irregular coupling activity. This work therefore provides an important foundation for deciphering terpenoid biosynthesis in mealybugs, including the sex pheromone biosynthesis in P. citri.

Countries
Slovenia, Spain, Slovenia
Keywords

žuželčji feromoni, info:eu-repo/classification/udc/577.2, phylogenetic analysis, Science, Q, monoterpenes, insect pheromones, isoprenyl diphosphate synthase, monoterpenes, phylogenetic analysis, Omics, isoprenyl diphosphate synthase, Biochemistry, Article, izoprenil difosfat sintaze, Phylogenetics, Planococcus citri, filogenetska analiza, PRODUCCION VEGETAL, žuželčji feromoni, izoprenil difosfat sintaze, monoterpeni, filogenetska analiza, monoterpeni, insect pheromones, Entomology

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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