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We consider the problem of uniformly generating a spanning tree for an undirected connected graph. This process is useful for computing statistics, namely for phylogenetic trees. We describe a Markov chain for producing these trees. For cycle graphs, we prove that this approach significantly outperforms existing algorithms. For general graphs, experimental results show that the chain converges quickly. This yields an efficient algorithm due to the use of proper fast data structures. To obtain the mixing time of the chain we describe a coupling, which we analyze for cycle graphs and simulate for other graphs.
FOS: Computer and information sciences, spanning tree, Discrete Mathematics (cs.DM), Industrial engineering. Management engineering, Markov chain, QA75.5-76.95, T55.4-60.8, spanning tree; uniform generation; Markov chain; mixing time; link-cut tree, mixing time, Electronic computers. Computer science, Computer Science - Data Structures and Algorithms, uniform generation, Data Structures and Algorithms (cs.DS), link-cut tree, Computer Science - Discrete Mathematics
FOS: Computer and information sciences, spanning tree, Discrete Mathematics (cs.DM), Industrial engineering. Management engineering, Markov chain, QA75.5-76.95, T55.4-60.8, spanning tree; uniform generation; Markov chain; mixing time; link-cut tree, mixing time, Electronic computers. Computer science, Computer Science - Data Structures and Algorithms, uniform generation, Data Structures and Algorithms (cs.DS), link-cut tree, Computer Science - Discrete Mathematics
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