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Molecular Phylogenetics and Evolution
Article . 2017 . Peer-reviewed
License: Elsevier TDM
Data sources: Crossref
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The mitogenome phylogeny of Adephaga (Coleoptera)

Authors: Lopez-Lopez, A; Vogler, AP;

The mitogenome phylogeny of Adephaga (Coleoptera)

Abstract

The beetle suborder Adephaga consists of several aquatic ('Hydradephaga') and terrestrial ('Geadephaga') families whose relationships remain poorly known. In particular, the position of Cicindelidae (tiger beetles) appears problematic, as recent studies have found them either within the Hydradephaga based on mitogenomes, or together with several unlikely relatives in Geadephaga based on 18S rRNA genes. We newly sequenced nine mitogenomes of representatives of Cicindelidae and three ground beetles (Carabidae), and conducted phylogenetic analyses together with 29 existing mitogenomes of Adephaga. Our results support a basal split of Geadephaga and Hydradephaga, and reveal Cicindelidae, together with Trachypachidae, as sister to all other Geadephaga, supporting their status as Family. We show that alternative arrangements of basal adephagan relationships coincide with increased rates of evolutionary change and with nucleotide compositional bias, but these confounding factors were overcome by the CAT-Poisson model of PhyloBayes. The mitogenome + 18S rRNA combined matrix supports the same topology only after removal of the hypervariable expansion segments. Densely sampled mitogenomes, analyzed with site heterogeneous mixture models, support a plausible hypothesis of basal relationships in the Adephaga.

Country
United Kingdom
Related Organizations
Keywords

BEETLES, Biochemistry & Molecular Biology, 570, SYSTEMATIC POSITION, 590, PhyloBayes, SEQUENCE DATA, 0608 Zoology, COMPREHENSIVE ANALYSIS, MITOCHONDRIAL GENOMES, Cicindelidae, 0603 Evolutionary Biology, RNA, Ribosomal, 18S, Animals, CARABIDAE, Phylogeny, MERUIDAE COLEOPTERA, Genetics & Heredity, Evolutionary Biology, 0604 Genetics, Science & Technology, Rate heterogeneity, Base Sequence, Geadephaga, Hydradephaga, DNA, Coleoptera, 18S rRNA, COMPOSITIONAL HETEROGENEITY, Genome, Mitochondrial, MORPHOLOGY, Insect Proteins, RIBOSOMAL-RNA, Life Sciences & Biomedicine

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
80
Top 1%
Top 10%
Top 1%
Green