
The multi-subunit type I CRISPR-Cas surveillance complex Cascade uses its crRNA to recognize dsDNA targets. Recognition involves DNA unwinding and base-pairing between the crRNA spacer region and a complementary DNA strand, resulting in formation of an R-loop structure. The modular Cascade architecture allows assembly of complexes containing crRNAs with altered spacer lengths that promise increased target specificity in emerging biotechnological applications. Here we produce type I-E Cascade complexes containing crRNAs with up to 57-nt-long spacers. We show that these complexes form R-loops corresponding to the designed target length, even for the longest spacers tested. Furthermore, the complexes can bind their targets with much higher affinity compared with the wild-type form. However, target recognition and the subsequent Cas3-mediated DNA cleavage do not require extended R-loops but already occur for wild-type-sized R-loops. These findings set important limits for specificity improvements of type I CRISPR-Cas systems.
QH301-705.5, Escherichia coli Proteins, CRISPR-Associated Proteins, single molecule, type I-E, Article, Protein Structure, Secondary, RNA, Bacterial, Cse2, CRISPR, Cascade, Cse1, Escherichia coli, Streptococcus thermophilus, R-loop, crRNA, Biology (General), CRISPR-Cas Systems, genome engineering, info:eu-repo/classification/ddc/610
QH301-705.5, Escherichia coli Proteins, CRISPR-Associated Proteins, single molecule, type I-E, Article, Protein Structure, Secondary, RNA, Bacterial, Cse2, CRISPR, Cascade, Cse1, Escherichia coli, Streptococcus thermophilus, R-loop, crRNA, Biology (General), CRISPR-Cas Systems, genome engineering, info:eu-repo/classification/ddc/610
| selected citations These citations are derived from selected sources. This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | 14 | |
| popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network. | Top 10% | |
| influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | Average | |
| impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network. | Top 10% |
