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Ecology and Evolution
Article . 2013 . Peer-reviewed
License: CC BY
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Ecology and Evolution
Article
License: CC BY
Data sources: UnpayWall
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PubMed Central
Article . 2014
License: CC BY
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A comparison of abundance estimates from extended batch‐marking and Jolly–Seber‐type experiments

Authors: Cowen, Laura L E; Besbeas, Panagiotis; Morgan, Byron J T; Schwarz, Carl J;

A comparison of abundance estimates from extended batch‐marking and Jolly–Seber‐type experiments

Abstract

AbstractLittle attention has been paid to the use of multi‐sample batch‐marking studies, as it is generally assumed that an individual's capture history is necessary for fully efficient estimates. However, recently, Huggins et al. () present a pseudo‐likelihood for a multi‐sample batch‐marking study where they used estimating equations to solve for survival and capture probabilities and then derived abundance estimates using a Horvitz–Thompson‐type estimator. We have developed and maximized the likelihood for batch‐marking studies. We use data simulated from a Jolly–Seber‐type study and convert this to what would have been obtained from an extended batch‐marking study. We compare our abundance estimates obtained from the Crosbie–Manly–Arnason–Schwarz (CMAS) model with those of the extended batch‐marking model to determine the efficiency of collecting and analyzing batch‐marking data. We found that estimates of abundance were similar for all three estimators: CMAS, Huggins, and our likelihood. Gains are made when using unique identifiers and employing the CMAS model in terms of precision; however, the likelihood typically had lower mean square error than the pseudo‐likelihood method of Huggins et al. (). When faced with designing a batch‐marking study, researchers can be confident in obtaining unbiased abundance estimators. Furthermore, they can design studies in order to reduce mean square error by manipulating capture probabilities and sample size.

Keywords

Original Research

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    11
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
11
Top 10%
Average
Average
Green
gold