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Impact of the implementation of MPI point-to-point communications on the performance of two general sparse solvers

Authors: Amestoy, Patrick; Duff, Iain S.; L'Excellent, Jean-Yves; Li, Xiaoye S.;

Impact of the implementation of MPI point-to-point communications on the performance of two general sparse solvers

Abstract

We examine the send and receive mechanisms of MPI and show how to implement message passing robustly so that performance is not significantly affected by changes to the MPI system. We discuss this within the context of two different parallel algorithms for sparse Gaussian elimination: a multifrontal solver (MUMPS), and a supernodal one (SuperLU). The performance of our initial strategies based on simple MPI point-to-point communication primitives is very sensitive to the MPI system, particularly the way MPI buffers are used. Using nonblocking communication primitives improves the performance and robustness, but at the cost of increased code complexity.

Keywords

[INFO.INFO-DC]Computer Science [cs]/Distributed, 000, Performance, [INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS], [INFO.INFO-DS] Computer Science [cs]/Data Structures and Algorithms [cs.DS], Buffers, Parallel, Communications, 004, Direct solvers, Engineering, and Cluster Computing [cs.DC], Message passing, Implementation, Sparse matrices, 42 Engineering, [INFO.INFO-DC] Computer Science [cs]/Distributed, Parallel, and Cluster Computing [cs.DC], MPI, Immediate communication primitives, Algorithms

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    7
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
7
Average
Average
Average
Green
bronze
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