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Semantic Mapping Reasoner and Assembler (SeMRA)

Authors: Hoyt, Charles Tapley; Karis, Klas; Gyori, Benjamin M.;

Semantic Mapping Reasoner and Assembler (SeMRA)

Abstract

This release contains improvements suggested during review of the SeMRA paper, importantly: better summaries of the raw mapping database and landscape databases, including the time it took to run search interface in the web application What's Changed Add configuration summarization by @cthoyt in https://github.com/biopragmatics/semra/pull/79 Update bioregistry by @cthoyt in https://github.com/biopragmatics/semra/pull/88 Add progress flags by @cthoyt in https://github.com/biopragmatics/semra/pull/83 Update Biomappings I/O by @cthoyt in https://github.com/biopragmatics/semra/pull/85 Improve label output with SSSOM by @cthoyt in https://github.com/biopragmatics/semra/pull/84 Add tests for prioritization by @cthoyt in https://github.com/biopragmatics/semra/pull/89 Improve configurability of mutations by @cthoyt in https://github.com/biopragmatics/semra/pull/86 Update docs by @cthoyt in https://github.com/biopragmatics/semra/pull/87 Continue improving docs by @cthoyt in https://github.com/biopragmatics/semra/pull/91 Update analyses by @cthoyt in https://github.com/biopragmatics/semra/pull/92 Make lookup of current author non-strict by @cthoyt in https://github.com/biopragmatics/semra/pull/95 Add example Cypher usage by @cthoyt in https://github.com/biopragmatics/semra/pull/97 Fix connected component query for graph display by @bgyori in https://github.com/biopragmatics/semra/pull/99 Add README output to raw database build by @cthoyt in https://github.com/biopragmatics/semra/pull/93 Add autcomplete search for concepts on landing page by @kkaris in https://github.com/biopragmatics/semra/pull/98 Full Changelog: https://github.com/biopragmatics/semra/compare/v0.1.3...v0.1.4

Please cite the SeMRA manuscript when using this software.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average