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ZENODO
Software . 2023
Data sources: ZENODO
ZENODO
Software . 2023
Data sources: Datacite
ZENODO
Software . 2023
Data sources: Datacite
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Data from: Integrated species distribution models to account for sampling biases and improve range wide occurrence predictions

Authors: Mäkinen, Jussi; Merow, Cory; Jetz, Walter;

Data from: Integrated species distribution models to account for sampling biases and improve range wide occurrence predictions

Abstract

Aim Species distribution models (SDMs) that integrate presence-only and presence-absence data offer a promising avenue to improve information on species' geographic distributions. The use of such 'integrated SDMs' on a species range-wide extent has been constrained by the often-limited presence-absence data and by the heterogeneous sampling of the presence-only data. Here, we evaluate integrated SDMs for studying species ranges with a novel expert range map-based evaluation. We build a new understanding about how integrated SDMs address issues of estimation accuracy and data deficiency and thereby offer advantages over traditional SDMs. Location South and Central America. Time period 1979-2017. Major taxa studied Hummingbirds. Methods We build integrated SDMs by linking two observation models – one for each data type – to the same underlying spatial process. We validate SDMs with two schemes: i) cross-validation with presence-absence data and ii) comparison with respect to the species' whole range as defined with IUCN range maps. We also compare models relative to the estimated response curves and compute the association between the benefit of the data integration and the number of presence records in each data set. Results The integrated SDM accounting for the spatially varying sampling intensity of the presence-only data was one of the top-performing models in both model validation schemes. Presence-only data alleviated overly large niche estimates, and data integration was beneficial compared to modelling solely presence-only data for species that had few presence points when predicting the species' whole range. On the community level, integrated models improved the species richness prediction. Main conclusions Integrated SDMs combining presence-only and presence-absence data are successfully able to borrow strengths from both data types and offer improved predictions of species' ranges. Integrated SDMs can potentially alleviate the impacts of taxonomically and geographically uneven sampling and to leverage the detailed sampling information in presence-absence data.

Funding provided by: E.O. Wilson Biodiversity FoundationCrossref Funder Registry ID: https://ror.org/03a01dc42Award Number: Funding provided by: National Aeronautics and Space AdministrationCrossref Funder Registry ID: https://ror.org/027ka1x80Award Number: 80NSSC22K0883 Funding provided by: National Aeronautics and Space AdministrationCrossref Funder Registry ID: https://ror.org/027ka1x80Award Number: 80NSSC17K0282 Funding provided by: National Aeronautics and Space AdministrationCrossref Funder Registry ID: https://ror.org/027ka1x80Award Number: 80NSSC18K0435 Funding provided by: National Science FoundationCrossref Funder Registry ID: https://ror.org/021nxhr62Award Number: 2225078

A detailed methodology associated with the environmental variables and species data can be found from the references used in the original publication.

Related Organizations
Keywords

Trochilidae, INLA, Citizen science, data integration, range prediction, spatial latent effect, sampling bias

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
Related to Research communities
Italian National Biodiversity Future Center