• 15. Life on land close

International Committee on Systematics of Prokaryotes : Subcommittee on the Taxonomy of Rhizobia and Agrobacteria Minutes, Videoconference, , -; Minutes of the closed meeting of the ICSP Subcommittee on the Taxonomy of Rhizobia and Agrobacteria held by videoconference on 17 July 2019, and list of recent species

The gastrointestinal tracts of animals contain diverse communities of microbes that provide a number of services to their hosts. There is recent concern that these communities may be lost as animals enter captive breeding programmes, due to changes in diet and/or exposure to environmental sources. However, empirical evidence documenting the effects of captivity and captive birth on gut communities is lacking. We conducted three studies to advance our knowledge in this area. First, we compared changes in microbial diversity of the gut communities of two species of woodrats (Neotoma albigula, a dietary generalist, and Neotoma stephensi, which specializes on juniper) before and after 6–9 months in captivity. Second, we investigated whether reintroduction of the natural diet of N. stephensi could restore microbial diversity. Third, we compared the microbial communities between offspring born in captivity and their mothers. We found that the dietary specialist, N. stephensi, lost a greater proportion of its native gut microbiota and overall diversity in response to captivity compared with N. albigula. Addition of the natural diet increased the proportion of the original microbiota but did not restore overall diversity in N. stephensi. Offspring of N. albigula more closely resembled their mothers compared with offspring–mother pairs of N. stephensi. This research suggests that the microbiota of dietary specialists may be more susceptible to captivity. Furthermore, this work highlights the need for further studies investigating the mechanisms underlying how loss of microbial diversity may vary between hosts and what an acceptable level of diversity loss may be to a host. This knowledge will aid conservation biologists in designing captive breeding programmes effective at maintaining microbial diversity. Sequence Accession Numbers: NCBI's Sequence Read Archive (SRA) – SRP033616 We compared microbial community structure in two rodent species before and after captivity. One species lost a greater proportion of diversity in captivity, which was not rescued when they were returned to their natural diet. Mothers effectively transmitted microbiota to their offspring. These results have implications for captive breeding programs.

Abstract Resource acquisition and growth yield are fundamental microbial traits that affect biogeochemical processes and have consequences for ecosystem functioning. However, there is a lack of empirical observations linking these traits. Using a landscape-scale survey of temperate near-neutral pH soils, we show tradeoffs in key community-level parameters linked to these traits. Increased investment into extracellular enzymes estimated using specific potential enzyme activity was associated with reduced growth yield obtained using carbon use efficiency measures from stable isotope tracing. Reduction in growth yield was linked more to carbon than nitrogen acquisition highlighting smaller stoichiometric than energetic constraints on community metabolism in examined soils.

Abstract Exposures of metamorphic basement in the Central Andes are scarce and reconstructions of the history of the Pacific margin of Gondwanaland must rely on a few isolated outcrops. We studied two areas of exposed basement in northernmost Chile (Belen) and westernmost Bolivia (Cerro Uyarani). The Belen metamorphic complex has been known for some time and consists of fault-bounded amphibolites, gneisses, schists, and minor quartzites overlain by folded Mesozoic to Cenozoic strata. The Cerro Uyarani is the only basement outcrop on the Bolivian Altiplano and has only recently been found and studied by geological reconnaissance. It consists of foliated mafic and felsic granulites, charnockites, and amphibolites. How do these basement occurrences compare and how do they relate to the other Precambrian crustal domains in the Central Andes? To answer these questions, we used geothermobarometers to reconstruct the P–T conditions of metamorphism, as well as geochemical analyses and petrological methods to study these rocks. The two basement blocks were found to have distinct geological histories and are probably separated by a major crustal domain boundary. Isotopic fingerprinting by Pb-isotopes clearly exclude Laurentian crustal components either in the protoliths or as reworked material. This signature is quite distinct from basement rocks farther south in Chile and northwestern Argentina.

Abstract Recent LiDAR (Light Detection and Ranging) survey in Tonga has documented a dense and complex archaeological landscape, particularly on the principal island of Tongatapu. Among the features revealed by the LiDAR are a profusion of earthen mounds, most of which are associated with residence, sporting, or burial in the period 1000–1850 CE. For identification and mapping of the mounds we use and evaluate two automated feature extraction (AFE) techniques, object-based image analysis and an inverted pit-filling algorithm (“iMound”). Accuracy of these methods was measured using an F1-score (harmonic mean of precision and recall). Variable AFE results indicate that continual and iterative fine-tuning is required. Successful mapping of some 10,000 mounds on Tongatapu reveals a distinct spatial structure that relates to traditional land division and tenure.

In order to accommodate foreseen climate change in European forests, the following are recommended: (i) to increase the number of tree species and the structural diversity; (ii) to replace unsuitable species by native broadleaved tree species, and (iii) to apply close-to-nature silviculture. The state forest department of Baden-Wurttemberg (BW) currently follows the concept of Forest Development Types (FDTs). However, future climatic conditions will have an impact on these types of forest as well as timber harvesting operations. This Geographic Information System (GIS)-based analysis identified appropriate locations for main FDTs and timber harvesting and extraction methods through the use of species suitability maps, topography, and soil sensitivity data. Based on our findings, the most common FDT in the state forest of BW is expected to be coniferous-beech mixed forests with 29.0% of the total forest area, followed by beech-coniferous (20.5%) and beech-broadleaved (15.4%) mixed forests. Where access for fully mechanized systems is not possible, the main harvesting and extraction methods would be motor manual felling and cable yarding (29.1%). High proportions of large dimensioned trees will require timber extraction using forestry tractors, and these will need to be operated from tractor roads on sensitive soils (23.0%), and from skid trails on insensitive soils (18.4%).

AbstractPermafrost conditions were examined between 2010 and 2014 at four sites across an alpine treeline on Peel Plateau, Northwest Territories, Canada. Ground and air temperature sensors were installed in forest and tundra between 30 and 500 m asl. Annual mean air temperatures increased and the number of freezing degree days declined with elevation, due to persistent winter air temperature inversions. The annual mean temperature at the permafrost surface (Tps) in mineral soils increased with elevation from about −2.5 °C in lowland forest to about −1.5 °C in dwarf shrub tundra. The increase in Tps coincided with higher air temperatures and earlier snow accumulation at tundra sites. The higher Tps in alpine tundra compared to lowland forest in Peel Plain contrasts with the northward decrease in Tps across latitudinal treeline elsewhere in the western Arctic. An increase in Tps with elevation may be common in Arctic mountain environments due to the prevalence of atmospheric temperature inversions in winter. In such contexts, although vegetation characteristics are governed by summer climate, permafrost conditions are critically influenced by the winter regime. The tundra permafrost on Peel Plateau is considerably warmer and, hence, more sensitive to disturbance than perennially frozen ground north of treeline in other parts of the western Arctic. Copyright © 2015 John Wiley & Sons, Ltd.

AbstractEven if global warming is kept below +2°C, European agriculture will be significantly impacted. Soil degradation may amplify these impacts substantially and thus hamper crop production further. We quantify biophysical consequences and bracket uncertainty of +2°C warming on calories supply from 10 major crops and vulnerability to soil degradation in Europe using crop modeling. The Environmental Policy Integrated Climate (EPIC) model together with regional climate projections from the European branch of the Coordinated Regional Downscaling Experiment (EURO‐CORDEX) was used for this purpose. A robustly positive calorie yield change was estimated for the EU Member States except for some regions in Southern and South‐Eastern Europe. The mean impacts range from +30 Gcal ha−1 in the north, through +25 and +20 Gcal ha−1 in Western and Eastern Europe, respectively, to +10 Gcal ha−1 in the south if soil degradation and heat impacts are not accounted for. Elevated CO2 and increased temperature are the dominant drivers of the simulated yield changes in high‐input agricultural systems. The growth stimulus due to elevated CO2 may offset potentially negative yield impacts of temperature increase by +2°C in most of Europe. Soil degradation causes a calorie vulnerability ranging from 0 to 50 Gcal ha−1 due to insufficient compensation for nutrient depletion and this might undermine climate benefits in many regions, if not prevented by adaptation measures, especially in Eastern and North‐Eastern Europe. Uncertainties due to future potentials for crop intensification are about 2–50 times higher than climate change impacts.