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ZENODO
Dataset . 2023
License: CC BY
Data sources: ZENODO
ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2023
License: CC BY
Data sources: Datacite
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Claim

Spatial metatranscriptomics resolves host-bacteria-fungi interactomes, Source Data

Research datakeyboard_double_arrow_right Dataset 20 Nov 2023 English Publisher:Zenodo
Authors: Saarenpää, Sami; Shalev, Or; Ashkenazy, Haim; Carlos, Vanessa; Lundberg, Derek Severi; Weigel, Detlef; Giacomello, Stefania;

doi: 10.5281/zenodo.8308137 , 10.5281/zenodo.8308136

Spatial metatranscriptomics resolves host-bacteria-fungi interactomes, Source Data

Abstract

Source Data for a publication: Spatial metatranscriptomics resolves host-bacteria-fungi interactomes. Includes the data sets to generate the results. Contains five different experiment types: - Pst bacterial infiltration experiment - Enrichment experiment with different array types - Comparison between SmT vs. Amp-seq - Outdoor-grown leaf experiments - Sterile leaf experiment For each of the experiments are included (if generated, see the README file): - Gene count matrices - Microbial taxa count matrices - Bright field images - Alignment files (Spot files) - Putative microbial reads and related probe information - Data for enrichment analysis - Fluorescent images and corresponding fluorescent values

Related Organizations
Keywords

Spatial Transcriptomics, Spatial metaTranscriptomics, Host-microbe interactions, Microbe, Transcriptomics

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visibility
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
1
Average
Average
Average
20
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