Recently the role of women increase not only in the domestic sector but also extend to the public sector. Based on this idea the government has issued a policy of coastal community program known as PEMP (Program Ekonomi Masyarakat Pesisir/ Coastal Community Economic Program). To achieve this goal PEMP issued a series of programs such as swamitra mina, Kedai pesisir (Coastal Shop), and KUB dan BLM. At this time the research focussed on KUB and BLM. This study aims to describe the process of institutional collaboration, as well as to explain the structure and role of each others in the process of empowerment. The results showed that the empowerment model of women in the Lamongan coastal community implemented by the existing community institutions there are; the government has the function of identification and assessment as well as region technical organizer. For the identification and assessment function, the government in collaboration with HNSI while for assistance activities the government in collaboration with educational institutions (Staidra and APS), for KUB Tunas Samudera TPD was commissioned by staidra institution. The process of empowerment with different TPD causes different outputs. KUB Tunas Samudera is excellent in entrepreneurship skills while KUB Putri Samudra is superior in koperasi management.