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Transcriptional and metabolic changes in Candida albicans during yeast-to-hypha transition

Authors: Enrico Garbe; Franziska Gerwien; Slavena Vylkova;

Transcriptional and metabolic changes in Candida albicans during yeast-to-hypha transition

Abstract

In this study hypha-associated transcriptional and metabolic changes were investigated in the opportunistich human pathogen Candida albicans. Three different strains were investigated the SC5314 wildtype and two filamentation-affected mutant strains cph1Δefg1Δ and hgc1Δ. Three different hypha-inducing conditions were compared with two respective yeast conditions: SD minimal medium with 10% human serum or N-acetylglucosamin vs. SD minimal medium, and M199 pH7.4 vs. M199 pH4. Sampling time points were 0, 90 and 240 min. ON cultures were prepared in SD and re-inoculated in SD and grown to early log-phase prior to the experiment. Cells were collected, washed and used to inoculate the test medium at OD0.3. All cultures were generally maintained at 37°C. Obtained samples were submitted for transcriptional profiling (RNA-Seq with 10 million reads per sample and 150 bp paired-ends) and metabolomics. Media list: SD: 2% glucose, 0.17% YNB without amino acids, 0.5% ammonium sulfate, pH 4.5 HS - SD with 10 vol% human serum (Male, AB negative) GlcNAc - 2% N-acetylglucosamine, 0.17% YNB without amino acids, 0.5% ammonium sulfate, pH 4.5 Medium 199 with Earle's salts and L-Glu buffered to either pH 4 or 7.4 by addition of 1/5 volume of 0.1 M citric acid and 0.2 M Na2HPO4 buffer

Keywords

Candida albicans, Metabolomics, Yeast-to-hypha transition, Transcriptomics

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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