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This archive contains all the data associated with the following publication PPIDomainMiner : Inferring domain-domain interactions from multiple sources of protein-protein interactions Seyed Ziaeddine Alborzi, Amina Ahmed Nacer, Hiba Najjar, David W Ritchie and Marie-Dominique Devignes. doi: https://doi.org/10.1101/2021.03.03.433732 to be published in PLOS Computational Biology in 2021. The archive is organized as follows A. Directory "Input Data" : all the files required to compute the PPIDM dataset B. Directory "Output Data" : all result files C. Directory "Evaluation Data" : all datasets used to evaluate the PPIDM dataset
This work was funded by Agence Nationale de la Recherche (grant numbers: ANR-11-MONU-006-02 and ANR-15-RHUS-0004), Inria Nancy Grand Est, and FEDER-Region Lorraine (CPER IT2MP). SZA was recipient of an Inria CORDI-S PhD fellowhip and AAN was recipient of a post-doctoral fellowship funded by the Region Lorraine and the Faculty Hospital of Nancy.
{"references": ["PPIDomainMiner : Inferring domain-domain interactions from multiple sources of protein-protein interactions Seyed Ziaeddine Alborzi, Amina Ahmed Nacer, Hiba Najjar, David W Ritchie and Marie-Dominique Devignes. doi: https://doi.org/10.1101/2021.03.03.433732 to be published in PLOS Computational Biology in 2021."]}
graph inference, Protein domains, domain-domain interactions
graph inference, Protein domains, domain-domain interactions
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