<script type="text/javascript">
<!--
document.write('<div id="oa_widget"></div>');
document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=undefined&type=result"></script>');
-->
</script>

COPY SCRIPT

For further information contact us at helpdesk@openaire.eu

Supplementary Data and Code: A subterranean adaptive radiation of amphipods in Europe

Research datakeyboard_double_arrow_right Dataset 28 May 2021 English Publisher:Zenodo

Authors: Borko, Špela; Trontelj, Peter; Seehausen, Ole; Moškrič, Ajda; Fišer, Cene;

doi: 10.5281/zenodo.4779097 , 10.5281/zenodo.4779096

Supplementary Data and Code: A subterranean adaptive radiation of amphipods in Europe

- Summary
- Subjects
- Related research
  (1)
- Metrics

Abstract

Supplementary Data, R code, alignments and settings for phylogenetic analyses for manuscript entitled A subterranean adaptive radiation of amphipods in Europe. The dataset contains Alignments and settings for phylogenetic analyses BEAST2_subset_alignment.nex→ BEAST2 analysis on a subset of MOTUs with at least two markers BEAST2_subset_settings.xml→ BEAST2 analysis on a subset of MOTUs with at least two markers BEAST2_whole_alignment.nex → BEAST2 analysis on a whole dataset of 377 Niphargus MOTUs (+ outgroup Niphargellus) BEAST2_whole_settings.xml → BEAST2 analysis on a whole dataset of 377 Niphargus MOTUs (+ outgroup Niphargellus) IQ-TREE_alignment.phy → IQ-TREE analysis IQ-TREE_settings.nex → IQ-TREE analysis MrBayes.nex → MrBayes analysis analyses.R → code for analyses on whole dataset analyses_small.R→ code for repeated LTT, DTT, CTT analyses on subset beast.trees → data for import into R: all BEAST2 trees beast_meanH.tre → data for import into R: maximum credibility tree beast_meanH_small.tre → data for import into R: small maximum credibility tree beast_small.trees → data for import into R: all small BEAST2 trees ecology.xlsx → data for import into R: ecological data morphology.xlsx → data for import into R: morphometric data

Related Organizations

University of Ljubljana
Slovenia
University of Bern
Switzerland

Keywords

subterranean amphipods, evolution, adaptive radiation

1 Research products, page of 1

Impact byBIP!

	citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	1
	popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.	Average
	influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	Average
	impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.	Average