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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: ZENODO
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: ZENODO
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2021
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2021
License: CC BY
Data sources: ZENODO
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Smithsonian figshare
Dataset . 2021
License: CC BY
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Smithsonian figshare
Dataset . 2021
License: CC BY
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Supplemental Material for "Estimating abundance based on time-to-detection data"

Authors: Strebel, Nicolas (10028060); Fiss, Cameron (10028063); Kellner, Kenneth (10028066); Larkin, Jeffery (10028069); Kéry, Marc (10028072); Cohen, Jonathan (10028075);

Supplemental Material for "Estimating abundance based on time-to-detection data"

Abstract

1. Many studies in ecology and management aim at quantifying absolute abundance based on counts at a set of surveyed sites. As time for data collection is typically limited, methods for reliable estimation of occupancy or abundance from low-cost data are desirable. Time-to-detection (TTD) models have shown promise for the estimation of occupancy. However, they remain heavily underutilized, and restricted to inference about occupancy, rather than abundance. 2. We developed a binomial N-mixture model for species-level TTD protocols that allows estimation of abundance with multiple- or single-visit data. An extension of the multi-visit version allows estimating availability per visit, given temporary emigration is random. We provide JAGS code and a new function (nmixTTD) in the R package unmarked for fitting a variety of such models. 3. Simulations showed accurate parameter estimation from single-visit species-level TTD data if individual detection probability is high (≥ ~0.7) and the number of visited sites is in the hundreds (≥ ~300). Additional visits improved the accuracy of estimates considerably. A comparison with the Royle-Nichols- and the classic binomial N-mixture-model revealed that the performance of our model is between these two, but require data that are less expensive and less error-prone than count data required for binomial N-mixture-models. In a case study, we found similar results when analysing data with the Royle-Nichols-, the binomial N-mixture-model or the multi-visit version of our TTD model. Analysing single-visit data with our model yielded lower abundance and higher detectability estimates. Presumably these differences are due to temporary emigration, as the single visit-method estimates the abundance of individuals available at one sampling occasion, whereas the multi-visit methods refer to the superpopulation, i.e. the number of individuals present over the study period. 4. Our new TTD-N-mixture model shows promise because it enables estimation of abundance, corrected for imperfect detection, for single- and multiple-visit data, based on data that is less expensive and that will be available in large quantities in the near future thanks to technical advances like autonomous recording units. The effects of unmodelled heterogeneity in detection rate and imperfect availability require further study.

Keywords

species-level TTD, abundance, time-to-detection, Ecology, Science Policy, Evolution, Supplemental Material, time-to-detection data, Method, imperfect detection, case study portion, Mathematical Sciences not elsewhere classified, Inorganic Chemistry, Raw dataset, binomial mixture models; imperfect detection; Royle-Nichols model; species-level TTD; time-to-detection; time-to-event, Royle-Nichols model, quot, code, time-to-event, Medicine, binomial mixture models, Biological Sciences not elsewhere classified

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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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