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ZENODO
Dataset . 2020
License: CC BY
Data sources: Datacite
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ZENODO
Dataset . 2020
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2020
License: CC BY
Data sources: ZENODO
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ZENODO
Dataset . 2020
License: CC BY
Data sources: Datacite
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Dataset . 2020
License: CC BY
Data sources: ZENODO
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Claim

On calculating the bending modulus of lipid bilayer membranes from buckling simulations

Research datakeyboard_double_arrow_right Dataset 19 Jun 2020Publisher:Zenodo
Authors: Eid Jad; Razmazma Hafez; Jraij Alia; Ebrahimi Ali; Monticelli Luca;

doi: 10.5281/zenodo.3901028 , 10.5281/zenodo.3901029 , 10.5281/zenodo.3901180

On calculating the bending modulus of lipid bilayer membranes from buckling simulations

Abstract

Molecular dynamics simulations files that correspond to the buckling simulations method to calculate the bending modulus and the box area fluctuations method to calculate the area compressibility modulus. We performed all molecular dynamics (MD) simulations using the GROMACS software (v. 2016.4) and the MARTINI coarse-grained (CG) force field (v. 2.2), using standard simulation parameters. Each file contains GRO, TOP, ITPs, and MDP files that correspond to the equilibration and the production runs. The name of each folder indicates the types of lipids. We simulate single-component lipid bilayers includes: DLPC, (14:0-14:0), DPPC (16:0-16:0), POPC (16:0-18:1), DOPC (18:1-18:1), PUPC (16:0-22:6), DLiPC (18:2-18:2), DNPC (24:6-24:6), POPG (16:0-18:1), POPS (16:0-18:1), POPE (16:0-18:1), and DPSM (16:0-16:0), and lipid mixtures includes : DOPC:CHOL, DPPC:CHOL, POPC:POPE, DPPC:DLPC, POPC:PUPC, DNPC:DLPC, and DPPC:DLiPC:CHOL, with different molar ratios specified in the folders names.

Related Organizations
Keywords

Bending modulus, Area compressibility, lipids mixtures.

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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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impulse
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