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Spa-neg: An Approach for Negation Detection in Clinical Text Written in Spanish

Authors: Oswaldo Solarte Pabón; Ernestina Menasalvas; Alejandro Rodríguez González;

Spa-neg: An Approach for Negation Detection in Clinical Text Written in Spanish

Abstract

Electronic health records contain valuable information written in narrative form. A relevant challenge in clinical narrative text is that concepts commonly appear negated. Several proposals have been developed to detect negation in clinical text written in Spanish. Much of these proposals have adapted the Negex algorithm to Spanish, but obtained results indicated lower performance than Negex implementations in other languages. Moreover, in most of these proposals, the validation process could be improved using a shared test corpus focused on negation in clinical text. This paper proposes Spa-neg, an approach to improve negation detection in clinical text written in Spanish. Spa-neg combines three elements: i) an exploratory data analysis of how negation is written in the clinical text, ii) use of regular expressions best adapted to the way in which negation is expressed in Spanish, iii) tests, and validation using a shared annotated corpus focused on negation. Obtained results suggest that the combination of these elements improves the process of negation detection. The tests performed shown 92% F-Score using IULA Spanish, an annotated corpus for negation

Keywords

Negation Detection, Electronic health records, Clinical natural Language Processing

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selected citations
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This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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