This deliverable is part of Work Package 5 (WP5), which aims to integrate state-of-the-art data mining, analysis and modelling tools into the NanoCommons Knowledge Base (KB). This will facilitate a linked data approach to integrate and exploit knowledge from publicly available sources and feed into the modelling tools for further studies. These tools, following integration, will be made available to the entire nanotechnology and nanosafety User community. For this process to be successful, a clearly defined modelling tools integration workflow needs to be developed and implemented. This workflow, along with the relevant guidance notes, will be also used in Work Package 8 (WP8) - Networking Activity 2 – Training aligned to TA / JRA to support the integration of Users’ modelling tools based on subsequent open calls for Transnational Access (TA) of the NanoCommons project.