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Dataset . 2019
License: CC BY
Data sources: ZENODO
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Dataset . 2019
License: CC BY
Data sources: Datacite
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Dataset . 2019
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Dataset . 2019
License: CC BY
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Dataset . 2019
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Dataset . 2019
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Data sources: Datacite
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Dataset . 2019
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Supplementary data and scripts for "An Atlas of Human Metabolism"

Research datakeyboard_double_arrow_right Dataset 01 Jan 2019Embargo end date: 20 Dec 2019 English Publisher:ZenodoFunded by:NIH | Deciphering the coupled r...
Authors: Robinson, Jonathan L.; Kocabaş, Pınar; Wang, Hao; Cholley, Pierre-Etienne; Cook, Daniel; Nilsson, Avlant; Anton, Mihail; +13 Authors

doi: 10.5281/zenodo.3578070 , 10.5281/zenodo.3577466 , 10.5281/zenodo.3583004 , 10.5281/zenodo.3577467

Supplementary data and scripts for "An Atlas of Human Metabolism"

Abstract

This repository contains the models, data, and scripts associated with the publication "An Atlas of Human Metabolism". The content is divided into two main directories, each containing their own README file containing instructions. tINIT_GEMs - Contains the genome-scale metabolic models (GEMs) generated in the study using the tINIT algorithm, as well as many scripts and datasets necessary to reproduce model generation, analyses, and figures. ec_GEMs - Contains the enzyme-constrained models (ecGEMs) generated in the study using the GECKO framework, as well as many scripts and datasets necessary to reproduce model generation, analyses, and figures. GEM_PRO - Contains the GEM-PRO dataframe with the protein structure information associated with the Human1 model.

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Keywords

human metabolism, genome-scale metabolic model, systems biology

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download
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
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0
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52
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