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Dataset . 2018
License: CC BY
Data sources: ZENODO
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ZENODO
Dataset . 2018
License: CC BY
Data sources: Datacite
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Dataset . 2018
License: CC BY
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Dataset . 2018
License: CC BY
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ZENODO
Dataset . 2019
License: CC BY
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Dataset . 2019
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Dataset . 2019
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ZENODO
Dataset . 2019
License: CC BY
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PathoPhenoDB: a database of pathogen-phenotype associations

Research datakeyboard_double_arrow_right Dataset 18 Oct 2018 English Publisher:Zenodo
Authors: Kafkas, Şenay; Abdelhakim, Marwa; Hashish, Yasmeen; Kulmanov, Maxat; Abdellatif, Marwa; Schofield, Paul; Hoehndorf, Robert;

doi: 10.5281/zenodo.1970276 , 10.5281/zenodo.1970275 , 10.5281/zenodo.2592941 , 10.5281/zenodo.2592933 , 10.5281/zenodo.2582409

PathoPhenoDB: a database of pathogen-phenotype associations

Abstract

PathoPhenoDB is a database containing pathogen-to-phenotype associations mined from the scientific literature. PathoPhenoDB relies on manual curation of pathogen-disease relations, and on ontology-based text mining to associate phenotypes with infectious disease. Using Semantic Web technologies, PathoPhenoDB also links to knowledge about drug resistance mechanisms and drugs used in the treatment of infectious diseases. The information in PathoPhenoDB can provide background knowledge about known pathogens, diseases, and phenotypes, and the drugs to which they respond; it therefore provides a tool for research on infectious diseases and drug mechanisms. PathoPhenoDB is accessible at http://patho.phenomebrowser.net/, and the data is freely available through a public SPARQL endpoint.

Version 1.2.1 includes labels and description; formal content is identical to v1.2.0.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
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