fix: predictLocalization and parseScores to correctly handle output from CELLO setParam report reactions not found in model mergeModels will only make new metFrom, rxnForm and geneFrom fields if none of the initial models have these fields handling of subSystems in various functions, RAVEN supports both cell arrays and nested cell arrays YAML file I/O for models without genes runINIT retains params as flag for optimizeProb input copyToComps does not add or modify metFrom, rxnForm or geneFrom fields addRxns makes sure that subSystems are nested cell arrays fitTasks parses correct arguments to fillGaps refactor: exportModel speed-up subSystems handling chore: updated BLAST+, DIAMOND, MAFFT and HMMER binaries update KEGG to release 116.0, retrained HMMs feat: runRAVENtests runs RAVEN unit tests findRAVENroot stores RAVEN root as MATLAB preference during checkInstallation, to avoid problems when running on HPC clusters doc: parseTaskList clarifies that it can handle both *.txt and *.xlsx as input