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ZENODO
Software . 2026
Data sources: ZENODO
ZENODO
Software . 2026
Data sources: Datacite
ZENODO
Software . 2026
Data sources: Datacite
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priyamdas2/pared: pared v0.1.0

Authors: Priyam Das;

priyamdas2/pared: pared v0.1.0

Abstract

pared v0.1.0 This release provides a citable archived version of pared, an R package for Pareto-based model selection using multi-objective optimization. pared is designed for model-selection settings in which users wish to balance multiple criteria, such as goodness-of-fit, sparsity, shrinkage, smoothness, structural similarity, and computational cost. The package provides a generic interface for user-defined multi-objective model-selection problems, together with built-in convenience wrappers for elastic net, fused lasso, fused graphical lasso, and group graphical lasso. The optimization routine uses Gaussian-process-based multi-objective optimization to approximate the Pareto front, and the package provides interactive two- and three-dimensional visualizations to help users inspect trade-offs among candidate models. Main functionality Generic Pareto-based model-selection interface through pared_optimize(). Support for user-defined objective functions, objective names, and objective directions. Built-in wrappers for elastic net, fused lasso, group graphical lasso, and fused graphical lasso. Interactive visualization of Pareto-optimal model-selection trade-offs. Examples demonstrating direct use with custom objectives and objective-space preferences. Simulation and case-study examples illustrating variable-selection and network-selection workflows. Software availability The development repository is available at: https://github.com/priyamdas2/pared This release corresponds to the software version archived for reproducible use with the revised Bioinformatics Advances manuscript.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average