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ZENODO
Dataset . 2025
License: CC BY
Data sources: ZENODO
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
ZENODO
Dataset . 2025
License: CC BY
Data sources: Datacite
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CT-EBM-SP - Corpus of Clinical Trials for Evidence-Based-Medicine in Spanish (version 3)

Authors: Campillos-Llanos, Leonardo; Valverde-Mateos, Ana; Capllonch-Carrión, Adrián; Zakhir Puig, Sofía; González Quevedo, David; López-Urbán, María Rosa; Hernando-Tundidor, Soledad; +1 Authors

CT-EBM-SP - Corpus of Clinical Trials for Evidence-Based-Medicine in Spanish (version 3)

Abstract

A collection of 1200 texts (292173 tokens) about clinical trials studies and clinical trials announcements in Spanish: - 500 abstracts from journals published under a Creative Commons license, e.g. available in PubMed or the Scientific Electronic Library Online (SciELO).- 700 clinical trials announcements published in the European Clinical Trials Register and Repositorio Español de Estudios Clínicos. Texts were annotated with the following entities types: - Semantic groups from the Unified Medical Language System: ANAT, CHEM, DEVI, DISO, LIVB, PHYS and PROC.- Medical drug information: Contraindicated, Dose_or_Strength, Form, and Route_or_Mode_of_administration.- Temporal expressions: Age, Date, Duration_or_Interval, Frequency and Time.- Miscellaneous medical entities: Concept, Food_or_Drink, Observation_or_Finding, Quantifier_or_Qualifier, and Result_or_Value.- Negation/Speculation: Neg_cue, Negated, Spec_cue and Speculated.- Attributes of temporality (Future, Family_history_of, and History_of), experiencer (Patient, Family_member and Other) and other information (Hypothetical). In addition, the following semantic relationships were annotated: - Intervention-related relations: • Has_Dose_or_Strength • Has_Drug_Form • Has_Route_or_Mode • Combined_with • Used_for • Has_Result_or_Value- Temporal relations: • Before • After • Overlap • Has_Age • Has_Frequency • Has_Duration_or_Interval- Event-related relations: • Causes • Experiences • Has_Quantifier_or_Qualifier • Location_of- Assertion relations: • Negation • Speculation 81.75% of the total entities were normalized to Unified Medical Language System (UMLS) Concept Unique Identifiers (CUIs). This is the final version with the corrections made after each file was reviewed by a a second reviewer. Two annotators reviewed each corpus file. Relation extraction Python code is available at the companion GitHub repository: https://github.com/lcampillos/ct-ebm-sp-v3

Keywords

Semantic Annotation, Evidence-based Medicine, Clinical Trials, Natural Language Processing

  • BIP!
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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    1
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
1
Average
Average
Average