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shenwei356/taxonkit: TaxonKit v0.19.0

integration_instructionsResearch softwarekeyboard_double_arrow_right Software 01 Nov 2024Publisher:Zenodo
Authors: Wei Shen; Antônio Camargo; Filipe G. Vieira; Mathias Walter;

doi: 10.5281/zenodo.15010979 , 10.5281/zenodo.6215559 , 10.5281/zenodo.15300237 , 10.5281/zenodo.14024701

shenwei356/taxonkit: TaxonKit v0.19.0

Abstract

Changes TaxonKit v0.19.0 new command taxonkit reformat2: Reformat lineage in chosen ranks, allowing more ranks than 'reformat' taxonkit reformat: Fix -T/--trim which did not work for -r/--miss-rank-repl. #106 Please cite Shen, W., Ren, H., TaxonKit: a practical and efficient NCBI Taxonomy toolkit, Journal of Genetics and Genomics, https://doi.org/10.1016/j.jgg.2021.03.006 Links Tips run taxonkit version to check update !!! run taxonkit genautocomplete to update Bash completion !!! OS |Arch |File, 中国镜像 |Download Count :------|:---------|:-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Linux |64-bit|taxonkit_linux_amd64.tar.gz, 中国镜像 | Linux |arm64 |taxonkit_linux_arm64.tar.gz, 中国镜像 | macOS |64-bit|taxonkit_darwin_amd64.tar.gz, 中国镜像 | macOS |arm64 |taxonkit_darwin_arm64.tar.gz, 中国镜像 | Windows|64-bit|taxonkit_windows_amd64.exe.tar.gz, 中国镜像|

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
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Average
Average
Average