
This StarDist model has been specifically fine-tuned for nuclei segmentation in images of Developing Tribolium Castaneum embryos, provided by Dr. A. Jain from the Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany. The model addresses the unique challenges presented by the 3D dataset from the Cell Tracking Challenge, which has been adapted to a 2D format for this purpose. - Dataset: Cell Tracking Challenge 3D Datasets The ZeroCostDL4Mic notebook used for fine-tuning is the StarDist in 2D. - Fine-Tuning Notebook: StarDist ZeroCostDL4Mic Notebook
bioimage.io
bioimage.io
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