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Dataset . 2017
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Data sources: ZENODO
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Dataset . 2017
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Data from: Ambient temperature-mediated changes in hepatic gene expression of a mammalian herbivore (Neotoma lepida)

Authors: Connors, Patrice Kurnath; Malenke, Jael R.; Dearing, M. Denise;

Data from: Ambient temperature-mediated changes in hepatic gene expression of a mammalian herbivore (Neotoma lepida)

Abstract

Herbivores regularly ingest natural toxins produced by plants as a defence against herbivory. Recent work suggests that compound toxicity is exacerbated at higher ambient temperatures. This phenomenon, known as temperature-dependent toxicity (TDT), is the likely result of decreased liver function at warmer temperatures; however, the underlying cause of TDT remains speculative. In the present study, we compared the effects of temperature and dietary plant toxins on differential gene expression in the liver of an herbivorous rodent (Neotoma lepida), using species-specific microarrays. Expression profiles revealed a greater number of differentially expressed genes at an ambient temperature below the thermal neutral zone for N. lepida (22°C) compared to one within (27°C). Genes and pathways upregulated at 22°C were related to growth and biosynthesis, whereas those upregulated at 27°C were associated with gluconeogenesis, apoptosis and protein misfolding, suggestive of a stressed state for the liver. Additionally, few genes associated with xenobiotic metabolism were induced when woodrats ingested plant toxins compared to nontoxic diets, regardless of temperature. Taken together, the results highlight the important role of ambient temperature on gene expression profiles in the desert woodrat. Temperatures just below the thermal neutral zone might be a favourable state for liver metabolism. Furthermore, the reduction in the number of genes expressed at a temperature within the thermal neutral zone indicates that liver function may be reduced at temperatures that are not typically considered as thermally stressful. Understanding how herbivorous mammals will respond to ambient temperature is imperative to accurately predict the impacts of climate change.

Feeding Trial DataData collected from woodrats (N=16) during 8-day feeding trial in laboratory setting. Data includes average daily food intake (g), average daily creosote resin intake (g), starting body mass (g), ending body mass (g), absolute liver size (g), and liver size as a percentage of ending body mass (%). Data also includes animal ID number and treatment group.data feeding trial.xlsxFeeding Trial Data Analysis NotesR script file including code used to analyze data from feeding trial.data feeding trial notes.R

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Keywords

Liver, Neotoma lepida, Holocene, endotherms, temperature-dependent toxicity, ambient temperature, plant secondary compounds, microarray

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popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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