Atlantid heteropods are a family of holoplanktonic marine gastropods that occur primarily in tropical and subtropical latitudes. Atlantids bear a delicate aragonitic shell (<14 mm) and live in the upper ocean, where ocean acidification and ocean warming have a pronounced effect. Therefore, atlantids are likely to be sensitive to these ocean changes. However, we lack sufficiently detailed information on atlantid taxonomy and biogeography, which is needed to gain a deeper understanding of the consequences of a changing ocean. To date, atlantid taxonomy has mainly relied on morphometrics and shell ornamentation, but recent molecular work has highlighted hidden diversity. This study uses an integrated approach in a global analysis of biogeography, variation in shell morphology and molecular phylogenies based on three genes (CO1, 28S and 18S) to resolve the species boundaries within theAtlanta brunneagroup. Results identify a new species,Atlanta vanderspoeli, from the Equatorial and South Pacific Ocean, and suggest that individuals ofA. brunnealiving in the Atlantic Ocean are an incipient species. Our results provide an important advance in atlantid taxonomy and will enable identification of these species in future studies of living and fossil plankton.