Powered by OpenAIRE graph
Found an issue? Give us feedback
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Biodiversity Informa...arrow_drop_down
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
Biodiversity Information Science and Standards
Article . 2020 . Peer-reviewed
License: CC BY
Data sources: Crossref
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
ZENODO
Article . 2020
License: CC BY
Data sources: ZENODO
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
Pensoft
Conference object . 2020
Data sources: Pensoft
versions View all 3 versions
addClaim

Herbaria Mundi: An image centric approach to manipulation of specimens from multiple collections

Authors: Roger Hyam;

Herbaria Mundi: An image centric approach to manipulation of specimens from multiple collections

Abstract

Addressing the challenges of the Climate Emergency and the Biodiversity Crisis requires us to understand how the world's vegetation is changing. This is not a trivial task,especially in highly diverse tropical areas. Frequently, the only way to characterise vegetation is to make voucher specimens of the plants present and identify them later in the lab. Fortunately there are extensive reference collections carefully curated in herbaria. Unfortunately specimens and expertise are dispersed over hundreds of different herbaria spread across many countries. It would be more efficient if scientists could see and manipulate specimens independently of where they are stored, especially as travel becomes more difficult due to both the need to reduce carbon emissions and virus spread. Herbaria Mundi is an application demonstrating how how this can be achieved using CETAF Specimen IDs and IIIF (International Image Interoperability Framework). The application mimics the way a botanist might work in a physical herbarium by enabling the gathering of specimens into groups and side-by-side comparison of specimens, but differs in that one can search for and manipulate specimens in multiple herbaria as if they were stored in a single collection. Voucher specimens are often not added to herbaria mainly because they do not add enough value to material already in the collections. Herbaria Mundi therefore includes the ability for researchers to upload specimen images to Zenodo and for them to appear in the user interface as if they were in an institutional herbarium. This proof of concept application is being developed as part of Task 4.3 of the Synthesys+ project funded by the European Commission. Two things need to occur to take this concept into production. More herbaria need to adopt the use of CETAF specimen identifiers and the IIIF image API. Botanists need to prioritise which features they would like developed first. More herbaria need to adopt the use of CETAF specimen identifiers and the IIIF image API. Botanists need to prioritise which features they would like developed first. The poster will be a catalyst to discuss how these things can be achieved.

Related Organizations
Keywords

herbarium specimens, imaging, identification, Zenodo, voucher specimens

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    0
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
    OpenAIRE UsageCounts
    Usage byUsageCounts
    visibility views 5
    download downloads 4
  • 5
    views
    4
    downloads
    Powered byOpenAIRE UsageCounts
Powered by OpenAIRE graph
Found an issue? Give us feedback
visibility
download
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
OpenAIRE UsageCountsDownloads provided by UsageCounts
0
Average
Average
Average
5
4
gold
Related to Research communities
Italian National Biodiversity Future Center