The intricate geomorphology of the coastline in the Chilean Channels and Fjords region, together with the freshwater inputs from the ice fields provide the area with very unique ecological characteristics and a variety of habitats that favour great marine biodiversity. However, although Chilean Patagonia has been the focus of several expeditions and ecological surveys, the greatest emphasis has been either on the populated coasts of the Beagle Channel and the Straits of Magellan to the south or the area to the north of Golfo de Penas, leaving vast areas that remain largely unexplored. This leads to a latitudinal gap in the faunistic information and hinders zoogeographic studies to assess biogeographical connections along the eastern coasts of the Pacific. Peracarida is a taxonomic group that provides an excellent model for such studies because of their high abundance and biodiversity, benthic habits, small size and limited dispersal capacity. A dataset providing the first and only records of the benthic Peracarida between the latitudes 48–51.5°S of the Pacific coast of Chile is presented here, hence closing a geospatial gap for the study of the biogeographical connections of the Peracarida along the Eastern Pacific coast. The dataset comprises a total of 141 georeferenced records of 60 sublittoral species of Tanaidacea, Isopoda and Amphipoda. This and other studies reveal that the coastal fauna of the region follow a latitudinal distribution pattern at a larger scale and nested assemblages inside the channels and fjords that can be regarded as a consequence of the more restrictive conditions in the inner parts. In the present scenario of global warming that is expected to affect particularly polar and subpolar regions, the present dataset serves as a reference for the distribution patterns of benthic organisms with low dispersal capacity.