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doi: 10.1038/ng.3836
pmid: 28394349
handle: 10261/198402 , 10668/11076 , 10722/247632 , 2318/1636123 , 1959.7/uws:63867 , 1959.4/unsworks_44736
doi: 10.1038/ng.3836
pmid: 28394349
handle: 10261/198402 , 10668/11076 , 10722/247632 , 2318/1636123 , 1959.7/uws:63867 , 1959.4/unsworks_44736
Genetic variation in the IFNL3-IFNL4 (interferon-λ3-interferon-λ4) region is associated with hepatic inflammation and fibrosis. Whether IFN-λ3 or IFN-λ4 protein drives this association is not known. We demonstrate that hepatic inflammation, fibrosis stage, fibrosis progression rate, hepatic infiltration of immune cells, IFN-λ3 expression, and serum sCD163 levels (a marker of activated macrophages) are greater in individuals with the IFNL3-IFNL4 risk haplotype that does not produce IFN-λ4, but produces IFN-λ3. No difference in these features was observed according to genotype at rs117648444, which encodes a substitution at position 70 of the IFN-λ4 protein and reduces IFN-λ4 activity, or between patients encoding functionally defective IFN-λ4 (IFN-λ4-Ser70) and those encoding fully active IFN-λ4-Pro70. The two proposed functional variants (rs368234815 and rs4803217) were not superior to the discovery SNP rs12979860 with respect to liver inflammation or fibrosis phenotype. IFN-λ3 rather than IFN-λ4 likely mediates IFNL3-IFNL4 haplotype-dependent hepatic inflammation and fibrosis.
570, Genotype, Veterinary and Food Sciences, 610, Hepacivirus, 3001 Agricultural Biotechnology, 30 Agricultural, Polymorphism, Single Nucleotide, 3105 Genetics, Linkage Disequilibrium, anzsrc-for: 30 Agricultural, Interferon Lambda, 3102 Bioinformatics and Computational Biology, 1311 Genetics, Gene Frequency, anzsrc-for: 3001 Agricultural Biotechnology, 616, XXXXXX - Unknown, Genetics, 2.1 Biological and endogenous factors, Humans, Polymorphism, anzsrc-for: 31 Biological Sciences, Inflammation, Reverse Transcriptase Polymerase Chain Reaction, Inflammatory and immune system, Interleukins, 3 Good Health and Well Being, Single Nucleotide, Fibrosis, Hepatitis C, anzsrc-for: 3105 Genetics, Logistic Models, International Liver Disease Genetics Consortium (ILDGC), anzsrc-for: 11 Medical and Health Sciences, Haplotypes, Liver, Multivariate Analysis, anzsrc-for: 06 Biological Sciences, Interferons, anzsrc-for: 3102 Bioinformatics and Computational Biology, 31 Biological Sciences
570, Genotype, Veterinary and Food Sciences, 610, Hepacivirus, 3001 Agricultural Biotechnology, 30 Agricultural, Polymorphism, Single Nucleotide, 3105 Genetics, Linkage Disequilibrium, anzsrc-for: 30 Agricultural, Interferon Lambda, 3102 Bioinformatics and Computational Biology, 1311 Genetics, Gene Frequency, anzsrc-for: 3001 Agricultural Biotechnology, 616, XXXXXX - Unknown, Genetics, 2.1 Biological and endogenous factors, Humans, Polymorphism, anzsrc-for: 31 Biological Sciences, Inflammation, Reverse Transcriptase Polymerase Chain Reaction, Inflammatory and immune system, Interleukins, 3 Good Health and Well Being, Single Nucleotide, Fibrosis, Hepatitis C, anzsrc-for: 3105 Genetics, Logistic Models, International Liver Disease Genetics Consortium (ILDGC), anzsrc-for: 11 Medical and Health Sciences, Haplotypes, Liver, Multivariate Analysis, anzsrc-for: 06 Biological Sciences, Interferons, anzsrc-for: 3102 Bioinformatics and Computational Biology, 31 Biological Sciences
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| influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | Top 10% | |
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