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DIGITAL.CSIC
Article . 2009 . Peer-reviewed
Data sources: DIGITAL.CSIC
International Journal of Bifurcation and Chaos
Article . 2010 . Peer-reviewed
Data sources: Crossref
https://dx.doi.org/10.48550/ar...
Article . 2008
License: arXiv Non-Exclusive Distribution
Data sources: Datacite
DBLP
Article . 2020
Data sources: DBLP
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SIMPLE MODELS FOR SCALING IN PHYLOGENETIC TREES

Authors: Emilio Hernández-García; Murat Tugrul; E. Alejandro Herrada; Víctor M. Eguíluz; Konstantin Klemm;

SIMPLE MODELS FOR SCALING IN PHYLOGENETIC TREES

Abstract

Many processes and models — in biological, physical, social, and other contexts — produce trees whose depth scales logarithmically with the number of leaves. Phylogenetic trees, describing the evolutionary relationships between biological species, are examples of trees for which such scaling is not observed. With this goal, we analyze numerically two branching models leading to nonlogarithmic scaling of the depth with the number of leaves. For Ford's alpha model, although a power-law scaling of the depth with tree size was established analytically, our numerical results illustrate that the asymptotic regime is approached only at very large tree sizes. We introduce here a new model, the activity model, showing analytically and numerically that it also displays a power-law scaling of the depth with tree size at a critical parameter value.

Country
Spain
Keywords

Statistical Mechanics (cond-mat.stat-mech), FOS: Biological sciences, Populations and Evolution (q-bio.PE), FOS: Physical sciences, Quantitative Biology - Populations and Evolution, Quantitative Biology - Quantitative Methods, Condensed Matter - Statistical Mechanics, Quantitative Methods (q-bio.QM)

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
OpenAIRE UsageCountsDownloads provided by UsageCounts
7
Average
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32
29
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bronze