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Applications in Plant Sciences
Article . 2017 . Peer-reviewed
License: CC BY NC SA
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Applications in Plant Sciences
Article
License: CC BY NC ND
Data sources: UnpayWall
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Development of SSR markers from transcriptomes for Orinus (Poaceae), an endemic of the Qinghai–Tibetan Plateau

Authors: Yu-Ping, Liu; Xu, Su; Wen-Chun, Luo; Ting, Lv; Ke-Long, Chen; A J, Harris; Sayed Afzal, Shah;

Development of SSR markers from transcriptomes for Orinus (Poaceae), an endemic of the Qinghai–Tibetan Plateau

Abstract

Premise of the study:Transcriptomes were used to develop microsatellite markers for the plant genus Orinus (Poaceae), which comprises three species of grasses (O. thoroldii, O. kokonoricus, and O. intermedius) that are widely distributed in the Qinghai–Tibetan Plateau.Methods and Results:Primer pairs were developed for 16 high‐quality simple sequence repeats (SSRs) using transcriptomes. SSRs were amplified in 248 individuals representing the three species of Orinus; the number of alleles per locus ranged from one to seven, with an average of 2.6. The expected and observed heterozygosity per locus varied from 0.00 to 0.83 and from 0.00 to 1.00, respectively, with respective mean values of 0.32 and 0.34.Conclusions:These newly developed SSR markers will be valuable for evaluating the population genetic structure of Orinus throughout its range.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
3
Average
Average
Average
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