A class-wide phylogenetic assessment of Dothideomycetes
Copyright policy )A class-wide phylogenetic assessment of Dothideomycetes
We present a comprehensive phylogeny derived from 5 genes, nucSSU, nucLSU rDNA, TEF1, RPB1 and RPB2, for 356 isolates and 41 families (six newly described in this volume) in Dothideomycetes. All currently accepted orders in the class are represented for the first time in addition to numerous previously unplaced lineages. Subclass Pleosporomycetidae is expanded to include the aquatic order Jahnulales. An ancestral reconstruction of basic nutritional modes supports numerous transitions from saprobic life histories to plant associated and lichenised modes and a transition from terrestrial to aquatic habitats are confirmed. Finally, a genomic comparison of 6 dothideomycete genomes with other fungi finds a high level of unique protein associated with the class, supporting its delineation as a separate taxon.
- Agricultural Research Service United States
- University of Pretoria South Africa
- University of Minnesota United States
- Mae Fah Luang University Thailand
- University of Minesota United States
570, Lichens, Saprobe, Plant Pathogens, Ascomycetes -- Phylogeny, Lichen, Plant Science, Multigene Phylogeny, plant pathogens, Ascomycota, Plant pathogen, evolution, Fungal Evolution, marine ascomycota, Tree Of Life, Phylogenomic, lichens, fungal evolution, molecular phylogeny, Multigene phylogeny, H20 - Maladies des plantes, Fungi -- Phylogeny, ribosomal dna-sequences, Tree of life, 500, Phylogenomics, multiple alignment, phylogenomics, Ascomycota; Dothideomyceta; Fungal evolution; Lichens; Multigene phylogeny; Pezizomycotina; Phylogenomics; Plant pathogens; Saprobes; Tree of life, multigene phylogeny, Articles, Pezizomycotina, rdna sequences, Tree of Life, Saprobes, classification, saprobes, Dothideomyceta, Plant pathogens, maximum-likelihood, Fungal evolution, fungi, multigene phylogenies
570, Lichens, Saprobe, Plant Pathogens, Ascomycetes -- Phylogeny, Lichen, Plant Science, Multigene Phylogeny, plant pathogens, Ascomycota, Plant pathogen, evolution, Fungal Evolution, marine ascomycota, Tree Of Life, Phylogenomic, lichens, fungal evolution, molecular phylogeny, Multigene phylogeny, H20 - Maladies des plantes, Fungi -- Phylogeny, ribosomal dna-sequences, Tree of life, 500, Phylogenomics, multiple alignment, phylogenomics, Ascomycota; Dothideomyceta; Fungal evolution; Lichens; Multigene phylogeny; Pezizomycotina; Phylogenomics; Plant pathogens; Saprobes; Tree of life, multigene phylogeny, Articles, Pezizomycotina, rdna sequences, Tree of Life, Saprobes, classification, saprobes, Dothideomyceta, Plant pathogens, maximum-likelihood, Fungal evolution, fungi, multigene phylogenies
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