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HAL Sorbonne Université
Article . 2025
License: CC BY
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Partitioning the phenotypic and genetic variances of reaction norms

Authors: de Villemereuil, Pierre; Chevin, Luis-Miguel;

Partitioning the phenotypic and genetic variances of reaction norms

Abstract

Many traits show plastic phenotypic variation across environments, captured by their norms of reaction. These reaction norms may be discrete or continuous, and can substantially vary in shape across organisms and traits, making it difficult to compare amounts and types of plasticity among (or even within) studies. In addition, the evolutionary potential of phenotypic traits and their plasticity in heterogeneous environments critically depends on how reaction norms vary genetically, but there is no consensus on how this should be quantified. Here, we propose a partitioning of phenotypic variance across genotypes and environments that jointly address these challenges. We start by distinguishing the components of phenotypic variance arising from the average reaction norm across genotypes, genetic variation in reaction norms (with additive and non-additive components), and a residual that cannot be predicted from the genotype and the environment. We then further partition the genetic variance of the trait (additive or not) into an environment-blind component and a component arising from genetic variance in plasticity. We show that the additive components can be expressed, and further decomposed according to the relative contributions from each parameter, using what we describe as the reaction norm gradient. This allows for a very general framework applicable from the character-state to curve-parameter approaches, including polynomial functions, or arbitrary non-linear models. To facilitate the use of this variance decomposition, we provide the Reacnorm R package, including a practical tutorial. Overall the toolbox we develop should serve as a basis for a unifying and deeper understanding of the variation and genetics of reaction norms and plasticity, as well as more robust comparative studies of plasticity across organisms and traits.

Country
France
Keywords

Archaeology, phenotypic plasticity, quantitative genetics, character-state approach, polynomial approach, non-linear modelling, Science, Q, [SDV.BID.EVO] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE], [SDV.GEN.GPO] Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE], CC1-960

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
5
Top 10%
Average
Top 10%
Green
Published in a Diamond OA journal