Cold seep is characterized by methane-rich fluids released from subsurface reservoirs, and it sustains the chemosynthetic ecosystems on the seafloor. Previous studies suggest that the activity of cold seep could affect the seawater chemistry and ambient temperature. However, the short-term seep activity was hardly reconstructed due to the focus of studies on carbonate or sediment. Vent macrofauna provide such an opportunity by recording in shells the immediate environment in which they grow. The carbonate skeleton of organisms could theoretically preserve environmental variation. Therefore, high-resolution archives are urgently required to understand the influence of cold seep activity on biogeochemistry. In this study, SEM, EDS mapping, EBSD mapping, and LA-ICP-MS analyses were conducted on a clam (Calyptogena sp.) shell collected alive in 2018 from the Haima cold seep in South China Sea. The CaCO3, Na, Mg, Sr, and Ba contents and the Sr/Ca, Ba/Ca, and Na/Ca ratios in the hinge plate were measured on LA-ICP-MS by spot analysis and line scanning. The element contents in the hinge are as follows: Mg (38.5-109 μg/g), Na (3117-5246 μg/g), Sr (970-5371 μg/g), and Ba (2.9-11.5 μg/g). The results show that Sr, Re, and Ba content vary synchronously along the direction of growth, but Na has an opposite trend. The element analyses indicate that the eruption of the Haima cold seep was irregular, causing temperature, redox state, and pH changes in the cold seep ecosystem. These findings show that the irregular cold seep activities exert vital influences on the biogeochemistry of the cold seep ecosystem, which shed a light on cold seep biomonitoring.