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Applied and Environmental Microbiology
Article . 2015 . Peer-reviewed
License: ASM Journals Non-Commercial TDM
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Alginate Lyases from Alginate-Degrading Vibrio splendidus 12B01 Are Endolytic

Authors: Ahmet H, Badur; Sujit Sadashiv, Jagtap; Geethika, Yalamanchili; Jung-Kul, Lee; Huimin, Zhao; Christopher V, Rao;

Alginate Lyases from Alginate-Degrading Vibrio splendidus 12B01 Are Endolytic

Abstract

ABSTRACT Alginate lyases are enzymes that degrade alginate through β-elimination of the glycosidic bond into smaller oligomers. We investigated the alginate lyases from Vibrio splendidus 12B01, a marine bacterioplankton species that can grow on alginate as its sole carbon source. We identified, purified, and characterized four polysaccharide lyase family 7 alginates lyases, AlyA, AlyB, AlyD, and AlyE, from V. splendidus 12B01. The four lyases were found to have optimal activity between pH 7.5 and 8.5 and at 20 to 25°C, consistent with their use in a marine environment. AlyA, AlyB, AlyD, and AlyE were found to exhibit a turnover number ( k cat ) for alginate of 0.60 ± 0.02 s −1 , 3.7 ± 0.3 s −1 , 4.5 ± 0.5 s −1 , and 7.1 ± 0.2 s −1 , respectively. The K m values of AlyA, AlyB, AlyD, and AlyE toward alginate were 36 ± 7 μM, 22 ± 5 μM, 60 ± 2 μM, and 123 ± 6 μM, respectively. AlyA and AlyB were found principally to cleave the β-1,4 bonds between β- d -mannuronate and α- l -guluronate and subunits; AlyD and AlyE were found to principally cleave the α-1,4 bonds involving α- l -guluronate subunits. The four alginate lyases degrade alginate into longer chains of oligomers.

Keywords

Models, Molecular, Alginates, Protein Conformation, Hexuronic Acids, Temperature, Lyases, Hydrogen-Ion Concentration, Kinetics, Glucuronic Acid, Vibrio

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
77
Top 10%
Top 10%
Top 10%
bronze