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image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Journal of Fish Dise...arrow_drop_down
image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
Journal of Fish Diseases
Article . 2025 . Peer-reviewed
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Rapid Detection of Aeromonas veronii Using GGDEF Gene‐Based Colorimetric Loop‐Mediated Isothermal Amplification

Authors: Tien Tien Vicky Lau; Suat Moi Puah; Kek Heng Chua;

Rapid Detection of Aeromonas veronii Using GGDEF Gene‐Based Colorimetric Loop‐Mediated Isothermal Amplification

Abstract

ABSTRACTAeromonas veronii has emerged as an important fish pathogen that poses threats to the aquaculture industry worldwide, and rapid detection is essential to minimise negative economic impact. In this study, a colorimetric loop‐mediated isothermal amplification (LAMP) assay was developed to rapidly detect A. veronii, targeting a gene encoding GGDEF domain‐containing diguanylate cyclase. The entire LAMP reaction could be completed in 30 min at 65°C based on colour change from pink to yellow. In addition, the assay demonstrated 100% specificity with no cross reaction with other common fish pathogens. The detection limit (LOD) was 500 pg/μL using purified plasmid and 1.72 × 105 cfu/mL (equivalent to 1.72 × 102 cfu/reaction) using crude genomic DNA extracted from the pure culture of A. veronii ATCC 9071. LAMP demonstrated comparable performance to conventional PCR using 57 bacterial isolates, with 100% (20/20) specificity, 91.9% (34/37) sensitivity, 94.7% (54/57) accuracy and a 0.888 Cohen's kappa value. Lastly, the LOD of LAMP in a spiked water sample was 1.72 × 105 cfu/mL (equivalent to 3.44 × 103 cfu/reaction). Overall, our LAMP assay has a high level of diagnostic agreement with conventional PCR and can be used as a valuable tool for the rapid detection of A. veronii from environmental samples.

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Keywords

Fish Diseases, Molecular Diagnostic Techniques, Escherichia coli Proteins, Animals, Colorimetry, Aeromonas veronii, Phosphorus-Oxygen Lyases, Gram-Negative Bacterial Infections, Nucleic Acid Amplification Techniques, Sensitivity and Specificity

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
1
Average
Average
Average
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