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Experimental Dermatology
Article . 2015 . Peer-reviewed
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Next‐generation sequencing detection and characterization of a heterozygous novel splice junction mutation in the 2B domain of KRT1 in a family with diffuse palmoplantar keratoderma

Authors: Santasree, Banerjee; Yunqing, Ren; Tianying, Wei; Zhongwei, Zhou; Ping, Yu; Fenghui, Guan; Xiaonming, Wei; +5 Authors

Next‐generation sequencing detection and characterization of a heterozygous novel splice junction mutation in the 2B domain of KRT1 in a family with diffuse palmoplantar keratoderma

Abstract

AbstractDiffuse palmoplantar keratoderma (DPPK) is an autosomal‐dominant genodermatosis characterized by restricted, uniform hyperkeratosis on the palm and sole epidermis. DPPK is normally associated with dominant‐negative mutations in the keratin‐encoding gene, KRT1. We report a heterozygous novel point mutation in the exon 6 splice donor site of KRT1 (c.1254G>C) by next‐generation sequencing, resulting in the formation of two alternative transcripts, which segregates with DPPK in a four‐generation Chinese family. This results in both the complete loss of exon 6 and the simultaneous utilization of a novel in‐frame splice site 54 bases downstream of the mutation with the subsequent deletion of 42 amino acids and the insertion of 18 amino acids into the protein's 2B domain. This is the first report of a novel splice donor site mutation with aberrant splicing and the formation of two alternative transcripts causing DPPK. This study also demonstrates the value of next‐generation sequencing in the identification of novel disease‐causing mutations.

Keywords

Family Health, Male, China, Heterozygote, Genome, Human, DNA Mutational Analysis, High-Throughput Nucleotide Sequencing, Exons, Introns, Pedigree, Protein Structure, Tertiary, Alternative Splicing, Keratoderma, Palmoplantar, Mutation, Humans, Female, Keratin-1, Cytoskeleton

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
4
Average
Average
Average
bronze