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https://doi.org/10.1103/physre...
Article . 2024 . Peer-reviewed
License: APS Licenses for Journal Article Re-use
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https://dx.doi.org/10.48550/ar...
Article . 2024
License: arXiv Non-Exclusive Distribution
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Work distribution for unzipping processes

Authors: Peter Werner; Alexander K. Hartmann; Satya N. Majumdar;

Work distribution for unzipping processes

Abstract

A simple zipper model is introduced, representing in a simplified way, e.g., the folded DNA double helix or hairpin structures in RNA. The double stranded hairpin is connected to a heat bath at temperature $T$ and subject to an external force $f$, which couples to the free length $L$ of the unzipped sequence. Increasing the force, leads to an zipping/unzipping first-order phase transition at a critical force $f_c(T)$ in the thermodynamic limit of a very large chain. We compute analytically, as a function of temperature $T$ and force $f$, the full distribution $P(L)$ of free lengths in the thermodynamic limit and show that it is qualitatively very different for $ff_c$. Next we consider quasistatic work processes where the force is incremented according to a linear protocol. Having obtained $P(L)$ already allows us to derive an analytical expression for the work distribution $P(W)$ in the zipped phase $f

14 pages, 9 figures

Keywords

Statistical Mechanics (cond-mat.stat-mech), Biological Physics (physics.bio-ph), FOS: Physical sciences, Physics - Biological Physics, Computational Physics (physics.comp-ph), Physics - Computational Physics, Condensed Matter - Statistical Mechanics

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
Green