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Systematic Biology
Article
Data sources: UnpayWall
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Systematic Biology
Article
Data sources: UnpayWall
Systematic Biology
Article . 1996 . Peer-reviewed
Data sources: Crossref
Systematic Biology
Article . 1996 . Peer-reviewed
Data sources: Crossref
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A Likelihood-Ratio Test of Monophyly

Authors: John P. Huelsenbeck; David M. Hillis; Rasmus Nielsen;

A Likelihood-Ratio Test of Monophyly

Abstract

Many phylogenetic analyses are inspired by or depend upon the monophyly of a group specified a priori. Also, many evolutionary problems for which phytogenies are useful do not require every detail of the phylogeny to be estimated correctly but depend upon the monophyly (or lack thereof) of a particular group. We propose a likelihood-ratio test that compares whether the best trees estimated with and without the constraint of monophyly are significantly different. Simulation suggests that the test is conservative when the null hypothesis (a particular specified constraint) is correct. We applied the likelihood-ratio test of monophyly to the question of the relationship of the presumed-extinct marsupial wolf (Thyladnus). Specifically, we examined the null hypotheses that (1) the marsupial wolf does not form a monophyletic group with dasyurids and (2) the marsupial wolf is a basal member of the Australian radiation of mammals. Both hypotheses were rejected using the likelihood-ratio test of monophyly. (Likelihood-ratio test; max- imum likelihood; monophyly; phylogenetic methods; Thylacinus.)

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    104
    popularity
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    influence
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    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
104
Top 10%
Top 1%
Top 10%
bronze