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The carbohydrate-active enzyme database: functions and literature

Authors: Drula, Elodie; Garron, Marie-Line; Dogan, Suzan; Lombard, Vincent; Henrissat, Bernard; Terrapon, Nicolas;

The carbohydrate-active enzyme database: functions and literature

Abstract

Abstract Thirty years have elapsed since the emergence of the classification of carbohydrate-active enzymes in sequence-based families that became the CAZy database over 20 years ago, freely available for browsing and download at www.cazy.org. In the era of large scale sequencing and high-throughput Biology, it is important to examine the position of this specialist database that is deeply rooted in human curation. The three primary tasks of the CAZy curators are (i) to maintain and update the family classification of this class of enzymes, (ii) to classify sequences newly released by GenBank and the Protein Data Bank and (iii) to capture and present functional information for each family. The CAZy website is updated once a month. Here we briefly summarize the increase in novel families and the annotations conducted during the last 8 years. We present several important changes that facilitate taxonomic navigation, and allow to download the entirety of the annotations. Most importantly we highlight the considerable amount of work that accompanies the analysis and report of biochemical data from the literature.

Countries
France, France, Denmark
Keywords

570, MESH: Enzyme Activation, MESH: Humans, Nucleic Acid, Protein, [SDV]Life Sciences [q-bio], MESH: Enzymes, Carbohydrates, MESH: Databases, Enzymes, [SDV] Life Sciences [q-bio], Enzyme Activation, Database Issue, Humans, Databases, Nucleic Acid, Databases, Protein, MESH: Carbohydrates

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
2K
Top 0.01%
Top 0.1%
Top 0.01%
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gold