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Nucleic Acids Research
Article . 2000 . Peer-reviewed
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Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits

Authors: Albert, T K; Lemaire, Marc; van Berkum, N L; Gentz, R; Collart, Martine; Timmers, H T;

Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits

Abstract

The yeast CCR4-NOT protein complex is a global regulator of RNA polymerase II transcription. It is comprised of yeast NOT1 to NOT5, yeast CCR4 and additional proteins like yeast CAF1. Here we report the isolation of cDNAs encoding human NOT2, NOT3, NOT4 and a CAF1-like factor, CALIF. Analysis of their mRNA levels in different human tissues reveals a common ubiquitous expression pattern. A multitude of two-hybrid interactions among the human cDNAs suggest that their encoded proteins also form a complex in mammalian cells. Functional conservation of these proteins throughout evolution is supported by the observation that the isolated human NOT3 and NOT4 cDNAs can partially com-plement corresponding not mutations in yeast. Interestingly, human CALIF is highly homologous to, although clearly different from, a recently described human CAF1 protein. Conserved interactions of this factor with both NOT and CCR4 proteins and co-immunoprecipitation experiments suggest that CALIF is a bona fide component of the human CCR4-NOT complex.

Countries
Switzerland, Switzerland, Netherlands
Keywords

Transcription Factors/chemistry/genetics/metabolism, Cell Cycle Proteins/chemistry/genetics/metabolism, Saccharomyces cerevisiae Proteins, Receptors, CCR4, Mutation/genetics, Repressor Proteins/chemistry/genetics/metabolism, Genes, Fungal, Molecular Sequence Data, RNA, Messenger/analysis/genetics, Cell Cycle Proteins, Algemeen onderzoek, Cell Line, Fungal Proteins, Ribonucleases, Genes, Fungal/genetics, Two-Hybrid System Techniques, 616, Genetics, Animals, Humans, Fungal Proteins/genetics/metabolism, Amino Acid Sequence, RNA, Messenger, Geneeskunde(GENK), Cloning, Molecular, Conserved Sequence, Expressed Sequence Tags, Econometric and Statistical Methods: General, Gene Expression Profiling, Genetic Complementation Test, Proteins, Precipitin Tests, Saccharomyces cerevisiae/chemistry/cytology/genetics/metabolism, Mutation, Receptors, Chemokine, Conserved Sequence/genetics, Protein Binding, ddc: ddc:616

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
145
Top 10%
Top 1%
Top 10%
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gold