Functional traits can drive plant responses to short- and long-term stressful conditions, with potential effects on species persistence in local habitats, changes in population size and structure, and potential species range shifts in changing environments. We investigated whether ecophysiological traits in a rare cycad vary along environmental gradients and with ontogeny to understand intra-specific resource-use variation (e.g. symbiotic nitrogen fixation, nitrogen- and water-use efficiency) and possible species adaptations for different environments. Environmental gradients were characterized with 14 soil and topographic variables. Nitrogen- and water-use efficiency improved with ontogeny (from seedling to juvenile and adult stages) but declined as soil fertility decreased with increasing elevation. Conversely, reliance on symbiotic nitrogen fixation increased with elevation and varied slightly with ontogeny. Improved water-use efficiency at lower elevation and nitrogen fixation at higher elevation may represent key functional strategies for maintaining the lower and upper altitudinal species range limits, especially in arid environments where stressful conditions are intensifying due to climatic and land-use changes. In addition to facilitation linked to the regeneration niche, improved resource-use efficiency linked to the adult niche may strongly influence cycad distribution and persistence in contemporary environments. A functional approach to conservation of rare or endangered plant species may be needed in order to target the most sensitive stages to changing environmental conditions and to better understand potential range shifts and adaptive responses to global land-use and climate changes.