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Bioinformatics
Article . 2016 . Peer-reviewed
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Bioinformatics
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Bioinformatics
Article . 2017
DBLP
Article . 2020
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bdvis: visualizing biodiversity data in R

Authors: Vijay Barve; Javier Otegui;

bdvis: visualizing biodiversity data in R

Abstract

Abstract Summary: Biodiversity studies are relying increasingly on primary biodiversity records (PBRs) for modelling and analysis. Because biodiversity data are frequently ‘harvested’—i.e. not collected by the researcher for that particular study, but obtained from data aggregators such as the Global Biodiversity Information Facility—researchers need to be aware of strengths and weaknesses of their data before they venture into further analysis. R is becoming a lingua franca of data exploration and analysis. Here, we describe an R package, bdvis, which facilitates efforts to understand the gaps and strengths of PBR data with quick and useful visualization functions. Availability and Implementation: The full code of the R package bdvis, along with instructions on how to install and use it, is available via CRAN – The Comprehensive R Archive Network (http://cran.r-project.org/web/packages/bdvis/index.html) and in the corresponding author’s main GitHub repository: http://www.github.com/vijaybarve/bdvis. The source code is licensed under CC0 Contact: vijay.barve@gmail.com

Keywords

Programming Languages, Biodiversity, Software

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    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
10
Top 10%
Top 10%
Average
gold