Abstract The continuity of supply and quality of power are the two main significant aspects of today’s power delivery system. The Dynamic Voltage Restorer (DVR) is a series connected custom power device which improves the quality of power delivered to the consumers. This paper deals with the effectual exploitation of DVR for interconnecting the proton exchange membrane fuel cell (PEMFC) stack to the grid based on optimized proportional integral (PI) and fuzzy logic (FL) Controller. The real coded Genetic algorithm (GA) is used to optimize the PI controller parameters. The PEMFC operated boost converter is used to boost up the fuel cell output voltage to balance the DC side necessities of the voltage source converter (VSC). The proposed DVR provides balanced and unbalanced voltage sag/swell compensation, harmonic reduction as well as an active power injection to the grid. The designed method also protects the sensitive loads from source side power quality disturbances including short term interruption. In addition, the harmonic compensation performance of the proposed work is validated by comparing with the results of the H∞ controller based DVR under medium level voltage condition. The simulation results from MATLAB/SIMULINK are discussed to prove the effectiveness of the planned method.