Abstract The measurement of topography and of topographic change is essential for the study of many geomorphic processes. In recent years, structure from motion (SfM) techniques applied to photographs taken by camera-equipped unmanned aerial vehicles (UAVs) has become a powerful new tool for the generation of high resolution topography. The variety of available UAV systems continues to increase rapidly, but it is not clear whether increased UAV sophistication translates into improved quality of the calculated topography. To evaluate the lower end of the UAV spectrum, a simple low cost UAV was deployed to calculate high resolution topography in the Daan River gorge in western Taiwan, a site with a complicated 3D morphology and a wide range of surface types, making it a challenging site for topographic measurement. Terrestrial lidar surveys were conducted in parallel with UAV surveys in both June and November 2014, enabling an assessment of the reliability of the UAV survey to detect geomorphic changes in the range of 30 cm to several meters. A further UAV survey was conducted in June 2015 in order to quantify changes resulting from the 2015 spring monsoon. To evaluate the accuracy of the UAV derived topography, it was compared to terrestrial lidar data collected during the same survey period using the cloud-to-cloud comparison algorithm M3C2. The UAV-generated point clouds match the lidar point clouds well, with RMS errors of 30–40 cm; however, the accuracy of the SfM point clouds depends strongly on the characteristics of the surface being considered, with vegetation, water, and small scale texture causing inaccuracies. The lidar and SfM data yield similar maps of change from June to November 2014, with the same areas of geomorphic change detected by both methods. The SfM-generated change map for November 2014 to June 2015 indicates that the 2015 spring monsoon caused erosion throughout the gorge and highlights the importance of event-driven erosion in the Daan River. The results suggest that even very basic UAVs can yield data suitable for measuring geomorphic change on the scale of a channel reach.