Powered by OpenAIRE graph
Found an issue? Give us feedback
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Future Generation Co...arrow_drop_down
image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
Future Generation Computer Systems
Article
License: Elsevier Non-Commercial
Data sources: UnpayWall
image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
Future Generation Computer Systems
Article . 2017 . Peer-reviewed
License: Elsevier TDM
Data sources: Crossref
versions View all 2 versions
addClaim

This Research product is the result of merged Research products in OpenAIRE.

You have already added 0 works in your ORCID record related to the merged Research product.

Reproducibility of execution environments in computational science using Semantics and Clouds

Authors: Idafen Santana-Perez; Rafael Ferreira da Silva; Mats Rynge; Ewa Deelman; María S. Pérez-Hernández; Oscar Corcho;

Reproducibility of execution environments in computational science using Semantics and Clouds

Abstract

In the past decades, one of the most common forms of addressing reproducibility in scientific workflow-based computational science has consisted of tracking the provenance of the produced and published results. Such provenance allows inspecting intermediate and final results, improves understanding, and permits replaying a workflow execution. Nevertheless, this approach does not provide any means for capturing and sharing the very valuable knowledge about the experimental equipment of a computational experiment, i.e., the execution environment in which the experiments are conducted. In this work, we propose a novel approach based on semantic vocabularies that describes the execution environment of scientific workflows, so as to conserve it. We define a process for documenting the workflow application and its related management system, as well as their dependencies. Then we apply this approach over three different real workflow applications running in three distinct scenarios, using public, private, and local Cloud platforms. In particular, we study one astronomy workflow and two life science workflows for genomic information analysis. Experimental results show that our approach can reproduce an equivalent execution environment of a predefined virtual machine image on all evaluated computing platforms.

0,844

4,639

SCIE

367

354

14

Q1

Keywords

Scientific workflow, 3304 Tecnología de los ordenadores, 1203 Ciencia de los ordenadores, Life sciences, Reproducibility, Semantic metadata

  • BIP!
    Impact byBIP!
    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    25
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Top 10%
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
Powered by OpenAIRE graph
Found an issue? Give us feedback
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
25
Top 10%
Top 10%
Top 10%
hybrid